Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.23656	Prkwnk4	protein kinase, lysine deficient 4	11		69847
Gene Ontology	ATP binding | chloride ion homeostasis | chloride transport | cytoplasm | kinase activity | protein amino acid phosphorylation | protein binding | protein kinase activity | protein localization | protein serine/threonine kinase activity | tight junction | transferase activity
Human Homolog	PRKWNK4[protein kinase, lysine deficient 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCCAGAGA (2) ACCGGGCTGG (5) ACTCATTTTA TCTCCCAAAA TCTCCCGAAA (2) TCTCCCGAAG 21.3 0.0213 Cb medulloblastoma ACCGGGCTGG (5) TCTCCCGAAA (2) TCTCCCGAAG 32.3 0.0323 P8 GC+1d culture ACCGGCCTGG (2) ACCGGGCTGG (5) TCTCCCGAAA (2) TCTCCCGAAG 25 0.025 P8 GC+SHH+1d culture ACCGGGCTGG (5) TCTCCCGAAA (2) TCTCCCGAAG 25.7 0.0257 3T3 fibroblasts AAGCCAGAGA (2) ACCGGCCTGG (2) ACCGGGCTGG (5) TCTCCCGAAA (2) 28 0.028 E15 cortex ACCGGGCTGG (5) TCTCCCGAAA (2) 19.8 0.0198 P1 cortex ACCGGGCTGG (5) ATGCCTGGGA 9 0.009 Hypothalamus ACCGGCCTGG (2) ACTCATTTTA TCTCCCGAAA (2) TCTCCCGAAG 38 0.038 E12.5 retina ACCGGGCTGG (5) TCTCCCGAAA (2) TCTCCCGAAG 13.2 0.0132 E14.5 retina ACCGGGCTGG (5) TCTCCCGAAA (2) 10.9 0.0109 E16.5 retina TCTCCCGAAA (2) TCTCCCGAAG 25.3 0.0253 E18.5 retina ACTCATTTTA TCTCCCGAAA (2) 34.5 0.0345 P0.5 retina ACCGGGCTGG (5) TCTCCCAAAA TCTCCCGAAA (2) 17.7 0.0177 P2.5 retina TCTCCCGAAA (2) 8.8 0.0088 P4.5 retina TCTCCCGAAA (2) 11.9 0.0119 P6.5 retina ATGCCTGGGA TCTCCCGAAA (2) 16.7 0.0167 P10.5 crx- retina ACCGGGCTGG (5) ATGCCTGGGA TCTCCCGAAA (2) 11.2 0.0112 P10.5 crx+ retina ACCGGGCTGG (5) TCTCCCGAAA (2) TCTCCCGAAG 21.1 0.0211 Adult retinal ACCGGGCTGG (5) TCTCCCAAAA TCTCCCGAAA (2) TCTCCCGAAG 14.9 0.0149 ONL ACCGGCCTGG (2) TCTCCCGAAA (2) 5.7 0.0057