Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.23662	Sema6c	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	3		20360
Gene Ontology	development | extracellular space | integral to membrane | neurogenesis
Human Homolog	SEMA6C[sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 27 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTTTTTT (2) 4.9 0.0049 Cb medulloblastoma TTTTTTTTTT (2) 2.3 0.0023 P8 GC+1d culture AGTATCAGGG TTTTTTTTTT (2) 18.3 0.0183 P8 GC+SHH+1d culture AGTATCAGGG TTTTTTTTTT (2) 8.2 0.0082 E15 cortex TTTTTTTTTT (2) 4.9 0.0049 P1 cortex AGTATCAGGG TTTTTTTTTT (2) 9 0.009 Hypothalamus TTTTTTTTTT (2) 7.2 0.0072 E12.5 retina TTTTTTTTTT (2) 7.5 0.0075 E14.5 retina TTTTTTTTTT (2) 23.7 0.0237 E16.5 retina TTTTTTTTTT (2) 5.4 0.0054 E18.5 retina TTTTTTTTTT (2) 10.9 0.0109 P0.5 retina AGTATCAGGG GCCCAGCACA TTTTTTTTTT (2) 17.6 0.0176 P2.5 retina AGTATCAGGG CCCCTGCTGC (2) TTTTTTTTTT (2) 12.3 0.0123 P4.5 retina CCCCTGCTGC (2) TTTTTTTTTT (2) 11.9 0.0119 P6.5 retina TTTTTTTTTT (2) 8.3 0.0083 P10.5 crx+ retina TTTTTTTTTT (2) 3.8 0.0038 Adult retinal GCCCAGCACA TTTTTTTTTT (2) 9.3 0.0093 ONL TTTTTTTTTT (2) 3.8 0.0038