Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.23671
1500031H04Rik
RIKEN cDNA 1500031H04 gene
X
66995
Mm.23671
AI448995
expressed sequence AI448995
X
102911
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 73 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGAAGGGCC (
6
)
6.5
0.0065
P8 Cb GC
CATACTATAT
(
2
)
3.3
0.0033
P8 Cb GC
AACCTAAGGG (
9
)
1.6
0.0016
Cb medulloblastoma
CATACTATAT
(
2
)
16.2
0.0162
Cb medulloblastoma
GGCCCACATC
(
4
)
2.3
0.0023
P8 GC+1d culture
CTGAAGGGCC (
6
)
5.7
0.0057
P8 GC+1d culture
CATACTATAT
(
2
)
3.4
0.0034
P8 GC+1d culture
CCAGCAGCCT
(
7
)
2.3
0.0023
P8 GC+1d culture
GGCCCACATC
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
CTGAAGGGCC (
6
)
4.7
0.0047
P8 GC+SHH+1d culture
CATACTATAT
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
AACCTAAGGG (
9
)
1.2
0.0012
P8 GC+SHH+1d culture
CCAGCAGCCT
(
7
)
1.2
0.0012
P8 GC+SHH+1d culture
GCGCCTGTGA (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
GGCCCACATC
(
4
)
1.2
0.0012
3T3 fibroblasts
CTGAAGGGCC (
6
)
7
0.007
3T3 fibroblasts
CTGAGGCCCT (
5
)
3.5
0.0035
3T3 fibroblasts
GCGCCTGTGA (
6
)
3.5
0.0035
E15 cortex
CTGAAGGGCC (
6
)
9.9
0.0099
E15 cortex
ACATTAGATG
(
4
)
4.9
0.0049
E15 cortex
GGCCCACATC
(
4
)
4.9
0.0049
P1 cortex
CATACTATAT
(
2
)
22.7
0.0227
P1 cortex
GGCCCACATC
(
4
)
4.5
0.0045
Hypothalamus
CATACTATAT
(
2
)
23.5
0.0235
Hypothalamus
GGCCCACATC
(
4
)
10.9
0.0109
Hypothalamus
GGCCACATCA (
6
)
7.2
0.0072
Hypothalamus
ACATTAGATG
(
4
)
1.8
0.0018
E12.5 retina
CATACTATAT
(
2
)
3.8
0.0038
E12.5 retina
GCGCCTGTGA (
6
)
1.9
0.0019
E12.5 retina
GGCCCACATC
(
4
)
1.9
0.0019
E14.5 retina
ACATTAGATG
(
4
)
1.8
0.0018
E14.5 retina
CATACTATAT
(
2
)
1.8
0.0018
E14.5 retina
CTGAGGCCCT (
5
)
1.8
0.0018
E14.5 retina
GGCCACATCA (
6
)
1.8
0.0018
E16.5 retina
CTGAAGGGCC (
6
)
10.9
0.0109
E16.5 retina
CATACTATAT
(
2
)
9.1
0.0091
E16.5 retina
GGCCCACATC
(
4
)
3.6
0.0036
E16.5 retina
ACATTAGATG
(
4
)
1.8
0.0018
E16.5 retina
GGCCACATCA (
6
)
1.8
0.0018
E18.5 retina
CTGAAGGGCC (
6
)
3.6
0.0036
E18.5 retina
AAATTAAAAA (
8
)
1.8
0.0018
E18.5 retina
CATACTATAT
(
2
)
1.8
0.0018
E18.5 retina
GGCCACATCA (
6
)
1.8
0.0018
E18.5 retina
GGCCCACATC
(
4
)
1.8
0.0018
P0.5 retina
CATACTATAT
(
2
)
3.9
0.0039
P0.5 retina
CTGAAGGGCC (
6
)
3.9
0.0039
P0.5 retina
AACCTAAGGG (
9
)
2
0.002
P2.5 retina
CTGAAGGGCC (
6
)
3.5
0.0035
P2.5 retina
CATACTATAT
(
2
)
1.8
0.0018
P2.5 retina
CTGAGGCCCT (
5
)
1.8
0.0018
P2.5 retina
GCGCCTGTGA (
6
)
1.8
0.0018
P2.5 retina
GGCCACATCA (
6
)
1.8
0.0018
P4.5 retina
CATACTATAT
(
2
)
9.9
0.0099
P4.5 retina
AAATTAAAAA (
8
)
2
0.002
P4.5 retina
CTGAAGGGCC (
6
)
2
0.002
P4.5 retina
CTGAGGCCCT (
5
)
2
0.002
P4.5 retina
GGCCACATCA (
6
)
2
0.002
P6.5 retina
CATACTATAT
(
2
)
13.3
0.0133
P6.5 retina
GGCCCACATC
(
4
)
3.3
0.0033
P6.5 retina
AAATTAAAAA (
8
)
1.7
0.0017
P10.5 crx- retina
CATACTATAT
(
2
)
7.4
0.0074
P10.5 crx- retina
CTGAAGGGCC (
6
)
3.7
0.0037
P10.5 crx- retina
GGCCCACATC
(
4
)
1.9
0.0019
P10.5 crx+ retina
CATACTATAT
(
2
)
7.7
0.0077
P10.5 crx+ retina
CTGAGGCCCT (
5
)
1.9
0.0019
P10.5 crx+ retina
GGCCACATCA (
6
)
1.9
0.0019
Adult retinal
CATACTATAT
(
2
)
9.3
0.0093
Adult retinal
CTGAAGGGCC (
6
)
9.3
0.0093
Adult retinal
GGCCCACATC
(
4
)
5.6
0.0056
Adult retinal
AAATTAAAAA (
8
)
1.9
0.0019
ONL
GAGAGACCCA
(
4
)
5.7
0.0057
ONL
AAATTAAAAA (
8
)
1.9
0.0019
ONL
CATACTATAT
(
2
)
1.9
0.0019
