Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.236868	Rps3	ribosomal protein S3	7	7 49.6 cM	27050
Gene Ontology	cytoplasm | intracellular | nucleic acid binding | protein biosynthesis | ribonucleoprotein complex | ribosome | small ribosomal subunit | structural constituent of ribosome
Human Homolog	RPS3[ribosomal protein S3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 217 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGTTTGTGG (2) ATCAGGCAGA ATGAGTACAG ATGTGCAGTC CCCCAGCCAG (3) CCCCAGCCTG (3) CCCCATCCAG CTGCCCTGGG (2) GACATTAAAG (2) GCCCAGCCAG TCCCAGCCAG TGAGCATCGG (3) TGAGCATCGT TGCTCCTCAG (2) 146.5 0.1465 Cb medulloblastoma CCAGACCAAA CCCCAGCCAG (3) CTGCCCTGGG (2) GGTGGTGGCT TCCCAGCCAG TGAGCATCGG (3) TGAGCATCGT TGCTCCTCAG (2) 101.6 0.1016 P8 GC+1d culture ATGAGTACAG CCCCAGCCAG (3) CCCCAGCCTG (3) CTGCCCTGGG (2) GACATTAAAG (2) GCGCACAGCT TCCCAGCCAG TGAGCATCGG (3) TGAGCATCGT TGGTGGCTGG TTCTCCTCAT 179.1 0.1791 P8 GC+SHH+1d culture ATCAGGCAGA ATGAGTACAG ATGTGCAGTC CCAGACCAAA CCCAGCCAGT CCCCACCCAC CCCCAGCCAG (3) CCCCCAGCAG (2) CTGCCCTGGG (2) GACATTAAAG (2) GACTTGGCCC GCCCAGCCAG GCTGGTGGCT (3) TCCCAGCCAG TGAGCATCGG (3) TGCTCCTCAG (2) 174.5 0.1745 3T3 fibroblasts CACAGAAAGT (6) CCCCAGCCAG (3) GACATTAAAG (2) GACTTGGCCC TGAGCATCGT TGCTCCTCAG (2) 325.9 0.3259 E15 cortex CCCCAGCCAG (3) CCCCAGCCTG (3) CTGCCCTGGG (2) GACATTAAAG (2) GCTGGTGGCT (3) TCCCAGCCAG TGAGCATCGT TGGTGGCTGG 232.3 0.2323 P1 cortex CCCCAGCCAG (3) CCCCATCCAG 77.2 0.0772 Hypothalamus AAGTTGGTGA AAGTTTGTGG (2) CCCAGCCAGT CCCCAGCCAG (3) CTGCCCTGGG (2) CTTTCATAGG GACTTGGCCC GCTGGTGGCT (3) GGCTGGGCCC TGAGCATCGG (3) TGAGCATCGT TGCTCCTCAG (2) TGGTGGCTGG TTGAGCATTC (2) 128.5 0.1285 E12.5 retina CACAGAAAGT (6) CCCCACCCAC CCCCAGCCAG (3) CCCCCAGCCA (3) CTGCCCTGGG (2) CTTTCATAGG GACATTAAAG (2) GACTTGGCCC GCTGGTGGCT (3) TGAGCATCGT TGGTGGCTGG 291.1 0.2911 E14.5 retina ATATTCAGTT ATCAGGCAGA ATCTTCACTT ATGAGTACAG ATTTTCACTT CCCAGCAGTG (3) CCCCACCCAC CCCCAGCCAG (3) CTGCCCTGGG (2) GACTTGGCCC GCGCACAGCT GCGGTGCACA GCTGGTGGCT (3) TGAGCATCGT TGCTCCTCAG (2) TGGTGGCTGG 322.3 0.3223 E16.5 retina AAGTTTGTGG (2) ATCAGGCAGA ATCTTCACTT ATGAGTACAG ATGTGCAGTC CCCAGCCAGT CCCCAGCCAG (3) CCCCCAGCCA (3) CTGCCCTGGG (2) GACATTAAAG (2) GACTTGGCCC GCGCACAGCT GCTGGTGGCT (3) GGCTGGGCCC TCCCAGCCAG TGAGCATCGT TGCTCCTCAG (2) TGGTGGCTGG TTGAGCATTC (2) 371.1 0.3711 E18.5 retina CCCAGCCAGT CCCCAGCCAG (3) CCCCCAGCCA (3) CTTTCATAGG GACTTGGCCC GCGCACAGCT GCTGGTGGCT (3) TGAGCATCGG (3) TGAGCATCGT 199.9 0.1999 P0.5 retina ATGAGTACAG CCCCAGCCAG (3) CCCCAGCCTG (3) CCCCATCCAG CCCCCAGCCA (3) CTTTCATAGG GACATTAAAG (2) GACTTGGCCC GCTGGTGGCT (3) TGAGCATCGT 202.2 0.2022 P2.5 retina AAGTTTGTGG (2) ATGAGTACAG CCCAGCAGTG (3) CCCCAGCCAG (3) CTGCCCTGGG (2) GACATTAAAG (2) GACTTGGCCC GCTGGTGGTT TCCCAGCCAG TGAGCATCGT TGGTGGCTGG 156.9 0.1569 P4.5 retina AAGTTGGTGA ATCAGGCAGA ATGAGTACAG ATGTGCAGTC CCCCAGCCAG (3) GACATTAAAG (2) GACTTGGCCC GCTGGTGGTT GGCTGGGCCC TGAGCATCGG (3) TGAGCATCGT TGGTGGCTGG 170.6 0.1706 P6.5 retina ATGTGCAGTC CACAGAAAGT (6) CCCAGCAGTG (3) CCCAGCCAGT CCCCAGCCAG (3) CTGCCCTGGG (2) GACATTAAAG (2) GACTTGGCCC TGAGCATCGG (3) TGAGCATCGT TGGTGGCTGG 135.2 0.1352 P10.5 crx- retina AAGTTTGTGG (2) ATGAGTACAG CCCCAGCCAG (3) CTGCCCTGGG (2) GACTTGGCCC GCGGTGCACA GCTGGTGGCT (3) TCCCAGCCAG TGAGCATCGG (3) TGAGCATCGT 124.6 0.1246 P10.5 crx+ retina CCCCAGCCAG (3) CTGCCCTGGG (2) GACATTAAAG (2) GCTGGTGGTT GGCTGGGCCC TGAGCATCGG (3) TGGTGGCTGG 99.9 0.0999 Adult retinal AAGTTTGTGG (2) ATTTTCACTT CCAGACCAAA CCCCAGCCAG (3) CCCCCAGCAG (2) CTGCCCTGGG (2) GACATTAAAG (2) GACTTGGCCC GCGCACAGCT GCTGGTGGCT (3) GCTGGTGGTT TGAGCATCGG (3) TGAGCATCGT TGGTGGCTGG 100.6 0.1006 ONL ATGAGTACAG ATGTGCAGTC CCCCAGCCAG (3) CTGCCCTGGG (2) GACTTGGCCC GCGGTGCACA TGAGCATCGG (3) TGGTGGCTGG 47.7 0.0477