Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.23739	Xab2	XPA binding protein 2	8	8 A1.1	67439
Gene Ontology	DNA repair | intracellular | nucleus | RNA processing | transcription
Human Homolog	XAB2[XPA binding protein 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 9 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 73 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTCACTCCCC 9.8 0.0098 P8 Cb GC GCAGGAGTGA (7) 1.6 0.0016 P8 Cb GC GCTCATTAAA (2) 1.6 0.0016 Cb medulloblastoma GCTCATTAAA (2) 9.2 0.0092 Cb medulloblastoma AAGCTGCTGG (3) 2.3 0.0023 Cb medulloblastoma GAAAAAAAAG (6) 2.3 0.0023 Cb medulloblastoma GCAGGAGTGA (7) 2.3 0.0023 P8 GC+1d culture GTCACTCCCC 6.8 0.0068 P8 GC+1d culture AAGCTGCTGG (3) 1.1 0.0011 P8 GC+1d culture GAAAAAAAAG (6) 1.1 0.0011 P8 GC+1d culture GAAAAAAAAT (10) 1.1 0.0011 P8 GC+1d culture GAAGAAAAAA (18) 1.1 0.0011 P8 GC+1d culture GCTCATTAAA (2) 1.1 0.0011 P8 GC+SHH+1d culture GTCACTCCCC 8.2 0.0082 P8 GC+SHH+1d culture GCAGGAGTGA (7) 3.5 0.0035 P8 GC+SHH+1d culture GAAAAAAAAG (6) 2.3 0.0023 P8 GC+SHH+1d culture GCTCATTAAA (2) 2.3 0.0023 P8 GC+SHH+1d culture GAAGAAAAAA (18) 1.2 0.0012 3T3 fibroblasts GCAGGAGTGA (7) 3.5 0.0035 E15 cortex GCTCATTAAA (2) 9.9 0.0099 E15 cortex GTCACTCCCC 9.9 0.0099 P1 cortex GAAAAAAAAG (6) 4.5 0.0045 Hypothalamus AAGCTGCTGG (3) 1.8 0.0018 Hypothalamus GAAAAAAAAG (6) 1.8 0.0018 Hypothalamus GCTCATTAAA (2) 1.8 0.0018 Hypothalamus GTCACTCCCC 1.8 0.0018 E12.5 retina GTCACTCCCC 5.6 0.0056 E12.5 retina GCAGGAGTGA (7) 3.8 0.0038 E12.5 retina GCTCATTAAA (2) 3.8 0.0038 E12.5 retina GAAGAAAAAA (18) 1.9 0.0019 E14.5 retina GTCACTCCCC 9.1 0.0091 E14.5 retina GAAAAAAAAT (10) 3.6 0.0036 E14.5 retina GAAGAAAAAA (18) 1.8 0.0018 E14.5 retina GAAGAAAAAG (22) 1.8 0.0018 E14.5 retina GCTCATTAAA (2) 1.8 0.0018 E16.5 retina GTCACTCCCC 9.1 0.0091 E16.5 retina GCTCATTAAA (2) 3.6 0.0036 E16.5 retina AAGCTGCTGG (3) 1.8 0.0018 E16.5 retina GCAGGAGTGA (7) 1.8 0.0018 E18.5 retina GAAAAAAAAG (6) 3.6 0.0036 E18.5 retina GTCACTCCCC 3.6 0.0036 P0.5 retina GTCACTCCCC 7.9 0.0079 P0.5 retina AAGCTGCTGG (3) 2 0.002 P0.5 retina CACAGGATGC (3) 2 0.002 P0.5 retina GAAAAAAAAG (6) 2 0.002 P2.5 retina GTCACTCCCC 21.1 0.0211 P2.5 retina GCAGGAGTGA (7) 5.3 0.0053 P2.5 retina GCTCATTAAA (2) 3.5 0.0035 P2.5 retina GAAAAAAAAG (6) 1.8 0.0018 P2.5 retina GAAGAAAAAA (18) 1.8 0.0018 P4.5 retina GCTCATTAAA (2) 15.9 0.0159 P4.5 retina GTCACTCCCC 15.9 0.0159 P4.5 retina GAAAAAAAAG (6) 2 0.002 P4.5 retina GCAGGAGTGA (7) 2 0.002 P6.5 retina GTCACTCCCC 8.3 0.0083 P6.5 retina GCTCATTAAA (2) 5 0.005 P6.5 retina GAAAAAAAAG (6) 1.7 0.0017 P6.5 retina GAAAAAAAAT (10) 1.7 0.0017 P6.5 retina GAAGAAAAAA (18) 1.7 0.0017 P6.5 retina GAAGAAAAAG (22) 1.7 0.0017 P10.5 crx- retina GCAGGAGTGA (7) 3.7 0.0037 P10.5 crx- retina GTCACTCCCC 3.7 0.0037 P10.5 crx- retina GAAGAAAAAG (22) 1.9 0.0019 P10.5 crx- retina GCTCATTAAA (2) 1.9 0.0019 P10.5 crx+ retina GTCACTCCCC 5.8 0.0058 P10.5 crx+ retina GCTCATTAAA (2) 3.8 0.0038 P10.5 crx+ retina GCAGGAGTGA (7) 1.9 0.0019 Adult retinal GTCACTCCCC 7.4 0.0074 Adult retinal CACAGGATGC (3) 3.7 0.0037 ONL GTCACTCCCC 11.5 0.0115 ONL GCAGGAGTGA (7) 5.7 0.0057 ONL GCTCATTAAA (2) 5.7 0.0057 ONL GAAGAAAAAA (18) 1.9 0.0019