Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2379	Smpdl3a	sphingomyelin phosphodiesterase, acid-like 3A	10		57319
Gene Ontology	carbohydrate metabolism | extracellular space | hydrolase activity | hydrolase activity, acting on glycosyl bonds
Human Homolog	SMPDL3A[sphingomyelin phosphodiesterase, acid-like 3A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC GTGCTCCTGC (3) 1.6 0.0016 P8 Cb GC TGCGACTACT (2) 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma GTGCTCCTGC (3) 6.9 0.0069 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture GTGCTCCTGC (3) 2.3 0.0023 P8 GC+1d culture GTGTTCCTGC (2) 2.3 0.0023 P8 GC+1d culture CTATCAAGAT (4) 1.1 0.0011 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture ATGGTGCTAC (2) 4.7 0.0047 3T3 fibroblasts ATGGTGCTAC (2) 3.5 0.0035 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex ATGGTGCTAC (2) 9.9 0.0099 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus CTATCAAGAT (4) 5.4 0.0054 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina ATGGTGCTAC (2) 3.8 0.0038 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina ATGGTGCTAC (2) 9.1 0.0091 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina GTGCTCCTGC (3) 2 0.002 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina ATGGTGCTAC (2) 1.8 0.0018 P2.5 retina GTGTTCCTGC (2) 1.8 0.0018 P2.5 retina TGCGACTACT (2) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina ATGGTGCTAC (2) 3.3 0.0033 P6.5 retina CTATCAAGAT (4) 1.7 0.0017 P6.5 retina GTGCTCCTGC (3) 1.7 0.0017 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina ATGGTGCTAC (2) 1.9 0.0019 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal GTGCTCCTGC (3) 1.9 0.0019 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL ATGGTGCTAC (2) 1.9 0.0019 ONL TGCGACTACT (2) 1.9 0.0019