Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.237935
BC026657
cDNA sequence BC026657
2
208618
Mm.237935
8030447M02Rik
RIKEN cDNA 8030447M02 gene
2
399578
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 64 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
CGCACACACA
(
8
)
6.5
0.0065
P8 Cb GC
CTTAAAGAGT (
4
)
4.9
0.0049
P8 Cb GC
TGGCCGTCTG
(
3
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
CGCACACACA
(
8
)
6.9
0.0069
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
CGCACACACA
(
8
)
12.6
0.0126
P8 GC+1d culture
CTTAAAGAGT (
4
)
6.8
0.0068
P8 GC+1d culture
TAATTACAAA
(
7
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
CGCACACACA
(
8
)
10.5
0.0105
P8 GC+SHH+1d culture
CTTAAAGAGT (
4
)
3.5
0.0035
P8 GC+SHH+1d culture
AAAGCCTGGA (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
TGGCCGTCTG
(
3
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
CTTAAAGAGT (
4
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
CGCACACACA
(
8
)
19.8
0.0198
E15 cortex
AAAGCCTGGA (
6
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
CGCACACACA
(
8
)
3.6
0.0036
Hypothalamus
TGGCCGTCTG
(
3
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
CGCACACACA
(
8
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
TAATTACAAA
(
7
)
3.6
0.0036
E14.5 retina
AAAGCCTGGA (
6
)
1.8
0.0018
E14.5 retina
AAGATGCTGG
(
12
)
1.8
0.0018
E14.5 retina
CGCACACACA
(
8
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
AAAGCCTGGA (
6
)
1.8
0.0018
E16.5 retina
TAATTACAAA
(
7
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
TAATTACAAA
(
7
)
7.3
0.0073
E18.5 retina
CTTAAAGAGT (
4
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
CGCACACACA
(
8
)
5.9
0.0059
P0.5 retina
CTTAAAGAGT (
4
)
5.9
0.0059
P0.5 retina
AAGATGCTGG
(
12
)
3.9
0.0039
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
CTTAAAGAGT (
4
)
3.5
0.0035
P2.5 retina
TAATTACAAA
(
7
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
AAGATGCTGG
(
12
)
2
0.002
P4.5 retina
CGCACACACA
(
8
)
2
0.002
P4.5 retina
CTTAAAGAGT (
4
)
2
0.002
P4.5 retina
TAATTACAAA
(
7
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
CTTATTATTT
(
2
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
CGCACACACA
(
8
)
7.4
0.0074
P10.5 crx- retina
CTTAAAGAGT (
4
)
1.9
0.0019
P10.5 crx- retina
CTTATTATTT
(
2
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
CGCACACACA
(
8
)
3.8
0.0038
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
CGCACACACA
(
8
)
3.7
0.0037
Adult retinal
TTTTTATGCT (
3
)
3.7
0.0037
Adult retinal
TAATTACAAA
(
7
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
CTTATTATTT
(
2
)
3.8
0.0038
ONL
TTTTTATGCT (
3
)
1.9
0.0019
