Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.237941	Ypel1	yippee-like 1 (Drosophila)	16		106369
Mm.237941	AI115486	expressed sequence AI115486	16		106150
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 90 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC GGTCGGTTGT (3) 6.5 0.0065 P8 Cb GC ATCAAAGACA (4) 4.9 0.0049 P8 Cb GC CTATCTGCCC (2) 3.3 0.0033 P8 Cb GC AACGCCACTT (3) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma GTATTTCATA (8) 9.2 0.0092 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture GGTCGGTTGT (3) 5.7 0.0057 P8 GC+1d culture ATCAAAGACA (4) 1.1 0.0011 P8 GC+1d culture CCCAGAGCAC (4) 1.1 0.0011 P8 GC+1d culture CTATCTGCCC (2) 1.1 0.0011 P8 GC+1d culture GTATTTCATA (8) 1.1 0.0011 P8 GC+1d culture TTGTACTCCC (3) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture GGTCGGTTGT (3) 5.9 0.0059 P8 GC+SHH+1d culture CTATCTGCCC (2) 3.5 0.0035 P8 GC+SHH+1d culture AACGCCACTT (3) 2.3 0.0023 P8 GC+SHH+1d culture ATCAAAGACA (4) 1.2 0.0012 P8 GC+SHH+1d culture GAAATGCAAG (5) 1.2 0.0012 P8 GC+SHH+1d culture TTGTACTCCC (3) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts GGTCGGTTGT (3) 10.5 0.0105 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex CTATCTGCCC (2) 14.8 0.0148 E15 cortex GGTCGGTTGT (3) 9.9 0.0099 E15 cortex GTATTTCATA (8) 9.9 0.0099 E15 cortex AACGCCACTT (3) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex GAAGCGAAGG (4) 9.1 0.0091 P1 cortex GGTCGGTTGT (3) 4.5 0.0045 P1 cortex GTATTTCATA (8) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus GTATTTCATA (8) 3.6 0.0036 Hypothalamus CCCAGAGCAC (4) 1.8 0.0018 Hypothalamus GAAATGCAAG (5) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina GAAATGCAAG (5) 3.8 0.0038 E12.5 retina CTATCTGCCC (2) 1.9 0.0019 E12.5 retina GGTCGGTTGT (3) 1.9 0.0019 E12.5 retina GTATTTCATA (8) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina GGTCGGTTGT (3) 9.1 0.0091 E14.5 retina GTATTTCATA (8) 3.6 0.0036 E14.5 retina CTATCTGCCC (2) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina GGTCGGTTGT (3) 7.2 0.0072 E16.5 retina GTATTTCATA (8) 3.6 0.0036 E16.5 retina AACGCCACTT (3) 1.8 0.0018 E16.5 retina CTATCTGCCC (2) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina GGTCGGTTGT (3) 5.5 0.0055 E18.5 retina GTATTTCATA (8) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina GAAATGCAAG (5) 2 0.002 P0.5 retina GAAGCGAAGG (4) 2 0.002 P0.5 retina GGTCGGTTGT (3) 2 0.002 P0.5 retina GTATTTCATA (8) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina GGTCGGTTGT (3) 12.3 0.0123 P2.5 retina CTATCTGCCC (2) 1.8 0.0018 P2.5 retina GTATTTCATA (8) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina GGTCGGTTGT (3) 5.9 0.0059 P4.5 retina GTATTTCATA (8) 5.9 0.0059 P4.5 retina CTATCTGCCC (2) 2 0.002 P4.5 retina TTGTACTCCC (3) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina GGTCGGTTGT (3) 10 0.01 P6.5 retina GTATTTCATA (8) 6.7 0.0067 P6.5 retina GAAGCGAAGG (4) 3.3 0.0033 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina GGTCGGTTGT (3) 11.1 0.0111 P10.5 crx- retina ATCAAAGACA (4) 3.7 0.0037 P10.5 crx- retina CTATCTGCCC (2) 1.9 0.0019 P10.5 crx- retina GAAATGCAAG (5) 1.9 0.0019 P10.5 crx- retina GTATTTCATA (8) 1.9 0.0019 P10.5 crx- retina TTGTACTCCC (3) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina GGTCGGTTGT (3) 9.6 0.0096 P10.5 crx+ retina GTATTTCATA (8) 5.8 0.0058 P10.5 crx+ retina CCCAGAGCAC (4) 1.9 0.0019 P10.5 crx+ retina GAAATGCAAG (5) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal GGTCGGTTGT (3) 5.6 0.0056 Adult retinal GTATTTCATA (8) 5.6 0.0056 Adult retinal AACGCCACTT (3) 1.9 0.0019 Adult retinal GAAGCGAAGG (4) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL GTATTTCATA (8) 7.7 0.0077