Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.238043
2010205O06Rik
RIKEN cDNA 2010205O06 gene
5
70270
Mm.238043
Hps4
Hermansky-Pudlak syndrome 4 homolog (human)
5
5 59.0 cM
192232
Mm.238043
4933415B22Rik
RIKEN cDNA 4933415B22 gene
5
71178
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 41 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAAAAAAAAA (
196
)
47.3
0.0473
P8 Cb GC
CACTCCGACT
(
4
)
1.6
0.0016
P8 Cb GC
GTGCTTTGTA
(
3
)
1.6
0.0016
Cb medulloblastoma
TAAAAAAAAA (
196
)
106.4
0.1064
Cb medulloblastoma
CACTCCGACT
(
4
)
2.3
0.0023
Cb medulloblastoma
GTGCTTTGTA
(
3
)
2.3
0.0023
P8 GC+1d culture
TAAAAAAAAA (
196
)
66.2
0.0662
P8 GC+1d culture
GTGCTTTGTA
(
3
)
3.4
0.0034
P8 GC+SHH+1d culture
TAAAAAAAAA (
196
)
93.7
0.0937
P8 GC+SHH+1d culture
GTGCTTTGTA
(
3
)
3.5
0.0035
3T3 fibroblasts
TAAAAAAAAA (
196
)
7
0.007
E15 cortex
TAAAAAAAAA (
196
)
9.9
0.0099
P1 cortex
TAAAAAAAAA (
196
)
50
0.05
P1 cortex
ATACACTGAG
(
3
)
4.5
0.0045
Hypothalamus
TAAAAAAAAA (
196
)
32.6
0.0326
Hypothalamus
GTGCTTTGTA
(
3
)
9.1
0.0091
E12.5 retina
TAAAAAAAAA (
196
)
24.4
0.0244
E12.5 retina
GTGCTTTGTA
(
3
)
1.9
0.0019
E14.5 retina
TAAAAAAAAA (
196
)
41.9
0.0419
E14.5 retina
CACTCCGACT
(
4
)
3.6
0.0036
E14.5 retina
ATACACTGAG
(
3
)
1.8
0.0018
E16.5 retina
TAAAAAAAAA (
196
)
23.5
0.0235
E16.5 retina
GTGCTTTGTA
(
3
)
3.6
0.0036
E16.5 retina
CACTCCGACT
(
4
)
1.8
0.0018
E18.5 retina
TAAAAAAAAA (
196
)
107.3
0.1073
E18.5 retina
GTGCTTTGTA
(
3
)
5.5
0.0055
P0.5 retina
TAAAAAAAAA (
196
)
37.3
0.0373
P2.5 retina
TAAAAAAAAA (
196
)
72.2
0.0722
P2.5 retina
GTGCTTTGTA
(
3
)
1.8
0.0018
P4.5 retina
TAAAAAAAAA (
196
)
122.8
0.1228
P4.5 retina
GTGCTTTGTA
(
3
)
4
0.004
P6.5 retina
TAAAAAAAAA (
196
)
63.4
0.0634
P6.5 retina
GTGCTTTGTA
(
3
)
3.3
0.0033
P10.5 crx- retina
TAAAAAAAAA (
196
)
9.3
0.0093
P10.5 crx- retina
GTGCTTTGTA
(
3
)
5.6
0.0056
P10.5 crx+ retina
TAAAAAAAAA (
196
)
25
0.025
P10.5 crx+ retina
GTGCTTTGTA
(
3
)
3.8
0.0038
Adult retinal
TAAAAAAAAA (
196
)
18.5
0.0185
Adult retinal
GTGCTTTGTA
(
3
)
3.7
0.0037
ONL
TAAAAAAAAA (
196
)
28.7
0.0287
ONL
GTGCTTTGTA
(
3
)
5.7
0.0057
