Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.23808
D12Wsu95e
DNA segment, Chr 12, Wayne State University 95, expressed
12
12 57.0 cM
217864
Gene Ontology
nucleus
Human Homolog
RCOR1[REST corepressor 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 100 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
CCCTGGGTTC (
6
)
17.9
0.0179
P8 Cb GC
TTTTAAACTT (
3
)
6.5
0.0065
P8 Cb GC
TGGAAATATC
(
2
)
3.3
0.0033
P8 Cb GC
TCTCTCTGCT
(
2
)
1.6
0.0016
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
TTTTAAACTT (
3
)
6.9
0.0069
Cb medulloblastoma
CCCTGGGTTC (
6
)
4.6
0.0046
Cb medulloblastoma
TGGAAAATAT
(
3
)
4.6
0.0046
Cb medulloblastoma
TGTGTTTGAA (
4
)
4.6
0.0046
Cb medulloblastoma
TCTCTCTGCT
(
2
)
2.3
0.0023
Cb medulloblastoma
TGGAAATATC
(
2
)
2.3
0.0023
P8 GC+1d culture
CCCTGGGTTC (
6
)
114.2
0.1142
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
TCTCTCTGCT
(
2
)
8
0.008
P8 GC+1d culture
TTTTAAACTT (
3
)
8
0.008
P8 GC+1d culture
TGGAAAATAT
(
3
)
4.6
0.0046
P8 GC+1d culture
AAAAATAAAG (
7
)
1.1
0.0011
P8 GC+1d culture
GGGTGGCTTA (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
CCCTGGGTTC (
6
)
67.9
0.0679
P8 GC+SHH+1d culture
TTTTAAACTT (
3
)
7
0.007
P8 GC+SHH+1d culture
TCTCTCTGCT
(
2
)
5.9
0.0059
P8 GC+SHH+1d culture
TGGAAAATAT
(
3
)
1.2
0.0012
3T3 fibroblasts
CCCTGGGTTC (
6
)
708
0.708
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
TGTGTTTGAA (
4
)
3.5
0.0035
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
CCCTGGGTTC (
6
)
143.5
0.1435
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
CCCTGGGTTC (
6
)
68.2
0.0682
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
CCCTGGGTTC (
6
)
5.4
0.0054
Hypothalamus
AAAAATAAAG (
7
)
1.8
0.0018
Hypothalamus
AAAACTGTTG
(
5
)
1.8
0.0018
Hypothalamus
TGGAAAATAT
(
3
)
1.8
0.0018
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
CCCTGGGTTC (
6
)
35.7
0.0357
E12.5 retina
TTTTAAACTT (
3
)
9.4
0.0094
E12.5 retina
AAAAATAAAG (
7
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
CCCTGGGTTC (
6
)
14.6
0.0146
E14.5 retina
AAAAATAAAG (
7
)
1.8
0.0018
E14.5 retina
AAAACTGTTG
(
5
)
1.8
0.0018
E14.5 retina
TCTCTCTGCT
(
2
)
1.8
0.0018
E14.5 retina
TTTCTTTCTC (
5
)
1.8
0.0018
E14.5 retina
TTTTAAACTT (
3
)
1.8
0.0018
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
CCCTGGGTTC (
6
)
47.1
0.0471
E16.5 retina
CCCTTCCCTC
(
3
)
3.6
0.0036
E16.5 retina
GGGGCTCAAA (
3
)
3.6
0.0036
E16.5 retina
TTTTAAACTT (
3
)
3.6
0.0036
E16.5 retina
AAAACTGTTG
(
5
)
1.8
0.0018
E16.5 retina
TCTCTCTGCT
(
2
)
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
CCCTGGGTTC (
6
)
12.7
0.0127
E18.5 retina
TTTTAAACTT (
3
)
7.3
0.0073
E18.5 retina
CCCTTCCCTC
(
3
)
1.8
0.0018
E18.5 retina
GGGGCTCAAA (
3
)
1.8
0.0018
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
CCCTGGGTTC (
6
)
76.5
0.0765
P0.5 retina
GGGGCTCAAA (
3
)
3.9
0.0039
P0.5 retina
TCTCTCTGCT
(
2
)
3.9
0.0039
P0.5 retina
TTTTAAACTT (
3
)
3.9
0.0039
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
CCCTGGGTTC (
6
)
15.8
0.0158
P2.5 retina
TTTTAAACTT (
3
)
3.5
0.0035
P2.5 retina
TCTCTCTGCT
(
2
)
1.8
0.0018
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
CCCTGGGTTC (
6
)
31.7
0.0317
P4.5 retina
TCTCTCTGCT
(
2
)
4
0.004
P4.5 retina
TGGAAATATC
(
2
)
2
0.002
P4.5 retina
TTTTAAACTT (
3
)
2
0.002
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
CCCTGGGTTC (
6
)
45
0.045
P6.5 retina
TTTTAAACTT (
3
)
5
0.005
P6.5 retina
GGGGCTCAAA (
3
)
3.3
0.0033
P6.5 retina
AAAAATAAAG (
7
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
CCCTGGGTTC (
6
)
83.6
0.0836
P10.5 crx- retina
TCTCTCTGCT
(
2
)
1.9
0.0019
P10.5 crx- retina
TTTTAAACTT (
3
)
1.9
0.0019
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
CCCTGGGTTC (
6
)
5.8
0.0058
P10.5 crx+ retina
TTTTAAACTT (
3
)
5.8
0.0058
P10.5 crx+ retina
TGGAAAATAT
(
3
)
3.8
0.0038
P10.5 crx+ retina
GGGGCTCAAA (
3
)
1.9
0.0019
P10.5 crx+ retina
GGGTGGCTTA (
5
)
1.9
0.0019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
CCCTGGGTTC (
6
)
31.5
0.0315
Adult retinal
CCCTTCCCTC
(
3
)
3.7
0.0037
Adult retinal
AAAAATAAAG (
7
)
1.9
0.0019
Adult retinal
GGGGCTCAAA (
3
)
1.9
0.0019
Adult retinal
TTTCTTTCTC (
5
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
CCCTGGGTTC (
6
)
9.6
0.0096
ONL
GGGGCTCAAA (
3
)
1.9
0.0019
ONL
TGGAAAATAT
(
3
)
1.9
0.0019
ONL
TTTCTTTCTC (
5
)
1.9
0.0019
ONL
TTTTAAACTT (
3
)
1.9
0.0019
