Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2381	Rps12	ribosomal protein S12	2		20042
Mm.2381	Aplp1	amyloid beta (A4) precursor-like protein 1	7	7 8.0 cM	11803
Gene Ontology	apoptosis | binding | cell adhesion | cell death | coated pit | endocytosis | extracellular space | heparin binding | integral to membrane | protein binding
Human Homolog	APLP1[amyloid beta (A4) precursor-like protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 41 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTATGAGAA (4) 8.2 0.0082 P8 Cb GC GCTGCAGCCA (8) 1.6 0.0016 Cb medulloblastoma GCTATGAGAA (4) 6.9 0.0069 Cb medulloblastoma GCTGACAGCC (4) 2.3 0.0023 P8 GC+1d culture GCTATGAGAA (4) 14.8 0.0148 P8 GC+1d culture GCTGACAGCC (4) 2.3 0.0023 P8 GC+1d culture GCTGCAGCCA (8) 1.1 0.0011 P8 GC+SHH+1d culture GCTATGAGAA (4) 14.1 0.0141 P8 GC+SHH+1d culture GCTGACAGCC (4) 1.2 0.0012 P8 GC+SHH+1d culture GCTGCAGCCA (8) 1.2 0.0012 3T3 fibroblasts CTGACTGGAG (5) 3.5 0.0035 E15 cortex GCTATGAGAA (4) 9.9 0.0099 P1 cortex GCTATGAGAA (4) 59.1 0.0591 Hypothalamus GCTATGAGAA (4) 21.7 0.0217 Hypothalamus GCTGACAGCC (4) 7.2 0.0072 Hypothalamus GGAGCTGGAG (7) 5.4 0.0054 E12.5 retina GCTATGAGAA (4) 5.6 0.0056 E14.5 retina CTGACTGGAG (5) 3.6 0.0036 E14.5 retina GCTATGAGAA (4) 1.8 0.0018 E14.5 retina GCTGACAGCC (4) 1.8 0.0018 E16.5 retina GCTATGAGAA (4) 5.4 0.0054 E16.5 retina GGAGCTGGAG (7) 1.8 0.0018 E18.5 retina GCTATGAGAA (4) 5.5 0.0055 E18.5 retina GGAGCTGGAG (7) 1.8 0.0018 P0.5 retina GCTATGAGAA (4) 5.9 0.0059 P0.5 retina GCTGCAGCCA (8) 2 0.002 P2.5 retina GCTATGAGAA (4) 3.5 0.0035 P2.5 retina CTGACTGGAG (5) 1.8 0.0018 P4.5 retina GCTATGAGAA (4) 9.9 0.0099 P4.5 retina GCTGCAGCCA (8) 2 0.002 P6.5 retina GCTATGAGAA (4) 6.7 0.0067 P6.5 retina GCTGACAGCC (4) 1.7 0.0017 P10.5 crx- retina GCTATGAGAA (4) 7.4 0.0074 P10.5 crx- retina CTGACTGGAG (5) 1.9 0.0019 P10.5 crx- retina GCTGACAGCC (4) 1.9 0.0019 P10.5 crx+ retina GCTATGAGAA (4) 7.7 0.0077 P10.5 crx+ retina CTGACTGGAG (5) 1.9 0.0019 P10.5 crx+ retina GCTGCAGCCA (8) 1.9 0.0019 Adult retinal GCTATGAGAA (4) 9.3 0.0093 Adult retinal CTGACTGGAG (5) 1.9 0.0019 ONL CTGACTGGAG (5) 1.9 0.0019