Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.23825	Mrpl20	mitochondrial ribosomal protein L20	4	4 83.0 cM	66448
Gene Ontology	mitochondrial large ribosomal subunit | protein biosynthesis | ribonucleoprotein complex | RNA binding | rRNA binding | structural constituent of ribosome
Human Homolog	MRPL20[mitochondrial ribosomal protein L20]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC TCAAAAAAAA (60) 17.9 0.0179 P8 Cb GC GCTTAAAGTA 9.8 0.0098 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC CCTGTTGCTA 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma TCAAAAAAAA (60) 99.4 0.0994 Cb medulloblastoma GCTTAAAGTA 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture TCAAAAAAAA (60) 17.1 0.0171 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture GCTTAAAGTA 2.3 0.0023 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture TCAAAAAAAA (60) 51.5 0.0515 P8 GC+SHH+1d culture GCTTAAAGTA 8.2 0.0082 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture GTCTTAAAGT (2) 1.2 0.0012 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts TCAAAAAAAA (60) 7 0.007 3T3 fibroblasts GCTTAAAGTA 3.5 0.0035 E15 cortex TCAAAAAAAA (60) 14.8 0.0148 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex TCAAAAAAAA (60) 22.7 0.0227 P1 cortex GCTTAAAGTA 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TCAAAAAAAA (60) 39.8 0.0398 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus GCTTAAAGTA 1.8 0.0018 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina TCAAAAAAAA (60) 18.8 0.0188 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina GCTTAAAGTA 3.8 0.0038 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina TCAAAAAAAA (60) 41.9 0.0419 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina CCTGTTGCTA 1.8 0.0018 E14.5 retina GCTTAAAGTA 1.8 0.0018 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina TCAAAAAAAA (60) 18.1 0.0181 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina GCTTAAAGTA 3.6 0.0036 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina TCAAAAAAAA (60) 49.1 0.0491 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina TCAAAAAAAA (60) 31.4 0.0314 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina GCTTAAAGTA 7.9 0.0079 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina TCAAAAAAAA (60) 35.2 0.0352 P2.5 retina TTTTTTTTTT (433) 7 0.007 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina TCAAAAAAAA (60) 37.6 0.0376 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina GCTTAAAGTA 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina TCAAAAAAAA (60) 31.7 0.0317 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina GCTTAAAGTA 1.7 0.0017 P10.5 crx- retina GCTTAAAGTA 22.3 0.0223 P10.5 crx- retina TCAAAAAAAA (60) 14.9 0.0149 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina CCTGTTGCTA 1.9 0.0019 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina TCAAAAAAAA (60) 17.3 0.0173 P10.5 crx+ retina GCTTAAAGTA 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 Adult retinal TCAAAAAAAA (60) 20.4 0.0204 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal GCTTAAAGTA 9.3 0.0093 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL TCAAAAAAAA (60) 15.3 0.0153 ONL GCTTAAAGTA 5.7 0.0057 ONL GTCTTAAAGT (2) 3.8 0.0038 ONL TTTTTTTTTT (433) 3.8 0.0038