Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.23834	Ythdf3	YTH domain family 3	3		229096
Mm.23834	5830468K08Rik	RIKEN cDNA 5830468K08 gene	3		76096
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC GAACAGGCAG (6) 17.9 0.0179 P8 Cb GC AGAATTTAAA (5) 1.6 0.0016 P8 Cb GC GAATAACAAA (3) 1.6 0.0016 P8 Cb GC TCATTCTGGA (2) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma AGAATTTAAA (5) 2.3 0.0023 Cb medulloblastoma GAACAGGCAG (6) 2.3 0.0023 Cb medulloblastoma GCAAAACAAA (6) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture GAACAGGCAG (6) 16 0.016 P8 GC+1d culture GAATAACAAA (3) 2.3 0.0023 P8 GC+1d culture GCATAACAAA (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture GAACAGGCAG (6) 16.4 0.0164 P8 GC+SHH+1d culture GAATAACAAA (3) 2.3 0.0023 P8 GC+SHH+1d culture AAGTAAGAAT (3) 1.2 0.0012 P8 GC+SHH+1d culture AGAATTTAAA (5) 1.2 0.0012 P8 GC+SHH+1d culture TAAATTCCCT (2) 1.2 0.0012 P8 GC+SHH+1d culture TCATTCTGGA (2) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GAACAGGCAG (6) 34.6 0.0346 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex GAACAGGCAG (6) 27.3 0.0273 P1 cortex GTTCCATCAA (4) 9.1 0.0091 P1 cortex GAATAACAAA (3) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GAACAGGCAG (6) 25.4 0.0254 Hypothalamus GAATAACAAA (3) 3.6 0.0036 Hypothalamus CCATAAAAAA (5) 1.8 0.0018 Hypothalamus GCATAACAAA (2) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina GAACAGGCAG (6) 7.5 0.0075 E12.5 retina GCAAAACAAA (6) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina GAACAGGCAG (6) 5.5 0.0055 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GAACAGGCAG (6) 7.2 0.0072 E16.5 retina TAAATTCCCT (2) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina CCATAAAAAA (5) 1.8 0.0018 E18.5 retina GAACAGGCAG (6) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GAACAGGCAG (6) 13.7 0.0137 P0.5 retina TCATTCTGGA (2) 5.9 0.0059 P0.5 retina GCAAAACAAA (6) 2 0.002 P0.5 retina GTTCCATCAA (4) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GAACAGGCAG (6) 8.8 0.0088 P2.5 retina CCATAAAAAA (5) 3.5 0.0035 P2.5 retina GCATAACAAA (2) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina AATTAAATCA (2) 7.9 0.0079 P4.5 retina GAACAGGCAG (6) 4 0.004 P4.5 retina AAGTAAGAAT (3) 2 0.002 P4.5 retina TCATTCTGGA (2) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina CCATAAAAAA (5) 5 0.005 P6.5 retina AATTAAATCA (2) 3.3 0.0033 P6.5 retina TCATTCTGGA (2) 3.3 0.0033 P6.5 retina AGAATTTAAA (5) 1.7 0.0017 P6.5 retina GAACAGGCAG (6) 1.7 0.0017 P6.5 retina GAATAACAAA (3) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GAACAGGCAG (6) 27.9 0.0279 P10.5 crx- retina AGAATTTAAA (5) 1.9 0.0019 P10.5 crx- retina CCATAAAAAA (5) 1.9 0.0019 P10.5 crx- retina TAAATTCCCT (2) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GAACAGGCAG (6) 13.5 0.0135 P10.5 crx+ retina GCATAACAAA (2) 3.8 0.0038 P10.5 crx+ retina AATTAAATCA (2) 1.9 0.0019 P10.5 crx+ retina CCATAAAAAA (5) 1.9 0.0019 P10.5 crx+ retina GAATAACAAA (3) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal GAACAGGCAG (6) 5.6 0.0056 Adult retinal CCATAAAAAA (5) 1.9 0.0019 Adult retinal GCATAACAAA (2) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL CCATAAAAAA (5) 1.9 0.0019 ONL GAACAGGCAG (6) 1.9 0.0019