Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.23876	Pcca	propionyl-Coenzyme A carboxylase, alpha polypeptide	14	14 E5 (14 64.0 cM)	110821
Gene Ontology	ATP binding | biotin binding | biotin metabolism | catalytic activity | ligase activity | metabolism | mitochondrion | mitochondrion | propionyl-CoA carboxylase activity | propionyl-CoA carboxylase activity
Human Homolog	PCCA[propionyl Coenzyme A carboxylase, alpha polypeptide]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 7 In Situ Hybridization Images

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SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAATAAATAA (12) 19.6 0.0196 P8 Cb GC CTTGAAAAAA (7) 1.6 0.0016 P8 Cb GC GTAGCAGAAG 1.6 0.0016 Cb medulloblastoma TTGTACTTAA (3) 16.2 0.0162 Cb medulloblastoma GTAGCAGAAG 6.9 0.0069 Cb medulloblastoma TAATAAATAA (12) 6.9 0.0069 Cb medulloblastoma CTTTCCTTGA (3) 2.3 0.0023 P8 GC+1d culture TAATAAATAA (12) 32 0.032 P8 GC+1d culture TTGTACTTAA (3) 2.3 0.0023 P8 GC+1d culture CTTGAAAAAA (7) 1.1 0.0011 P8 GC+1d culture GGGACCCCTG (7) 1.1 0.0011 P8 GC+SHH+1d culture TAATAAATAA (12) 32.8 0.0328 P8 GC+SHH+1d culture TTGTACTTAA (3) 7 0.007 P8 GC+SHH+1d culture CTTGAAAAAA (7) 2.3 0.0023 P8 GC+SHH+1d culture GTAGCAGAAG 1.2 0.0012 3T3 fibroblasts CTTTCCTTGA (3) 3.5 0.0035 E15 cortex TTGTACTTAA (3) 4.9 0.0049 P1 cortex GTAGCAGAAG 4.5 0.0045 Hypothalamus TAATAAATAA (12) 43.5 0.0435 Hypothalamus TTGTACTTAA (3) 10.9 0.0109 Hypothalamus GGGACCCCTG (7) 5.4 0.0054 Hypothalamus GTAGCAGAAG 1.8 0.0018 E12.5 retina TAATAAATAA (12) 39.4 0.0394 E12.5 retina CTTTCCTTGA (3) 3.8 0.0038 E12.5 retina GTAGCAGAAG 1.9 0.0019 E12.5 retina TTGTACTTAA (3) 1.9 0.0019 E14.5 retina TAATAAATAA (12) 60.1 0.0601 E14.5 retina TTGTACTTAA (3) 7.3 0.0073 E14.5 retina GTAGCAGAAG 1.8 0.0018 E16.5 retina TAATAAATAA (12) 36.2 0.0362 E16.5 retina TTGTACTTAA (3) 5.4 0.0054 E18.5 retina TAATAAATAA (12) 92.8 0.0928 E18.5 retina TTGTACTTAA (3) 9.1 0.0091 E18.5 retina CTTGAAAAAA (7) 1.8 0.0018 P0.5 retina TAATAAATAA (12) 27.5 0.0275 P0.5 retina GTAGCAGAAG 3.9 0.0039 P2.5 retina TAATAAATAA (12) 72.2 0.0722 P4.5 retina TAATAAATAA (12) 77.3 0.0773 P4.5 retina GGGACCCCTG (7) 2 0.002 P4.5 retina TTGTACTTAA (3) 2 0.002 P6.5 retina TAATAAATAA (12) 68.4 0.0684 P6.5 retina GTAGCAGAAG 1.7 0.0017 P6.5 retina TTGTACTTAA (3) 1.7 0.0017 P10.5 crx- retina TAATAAATAA (12) 11.1 0.0111 P10.5 crx- retina GGGACCCCTG (7) 1.9 0.0019 P10.5 crx- retina GTAGCAGAAG 1.9 0.0019 P10.5 crx+ retina TAATAAATAA (12) 15.4 0.0154 P10.5 crx+ retina TTGTACTTAA (3) 5.8 0.0058 P10.5 crx+ retina CTTTCCTTGA (3) 1.9 0.0019 Adult retinal TAATAAATAA (12) 5.6 0.0056 Adult retinal GTAGCAGAAG 1.9 0.0019 ONL TAATAAATAA (12) 23 0.023 ONL TTGTACTTAA (3) 5.7 0.0057 ONL CTTTCCTTGA (3) 3.8 0.0038