| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAACTGAAGC (2) GAGAGAAACA (3)
| 4.9 | 0.0049 |
| Cb medulloblastoma | GAAAGTACTC (2) GGGTGCATCT (3) TGAGGATCGA (2)
| 9.2 | 0.0092 |
| P8 GC+1d culture | GAAAGTACTC (2) GGTAAGTTTT (2)
| 9.1 | 0.0091 |
| P8 GC+SHH+1d culture | AAACTGAAGC (2) AGCTCTGGGG (2) GAAAGTACTC (2) GAGAGAAACA (3) GGGTGCATCT (3) GGTAAGTTTT (2) TGAGGATCGA (2)
| 13 | 0.013 |
| 3T3 fibroblasts | AGCTCTGGGG (2)
| 10.5 | 0.0105 |
| E15 cortex | GGTAAGTTTT (2)
| 4.9 | 0.0049 |
| P1 cortex | ACAGCACAGC (4) AGCTCTGGGG (2) GGTAAGTTTT (2)
| 22.7 | 0.0227 |
| Hypothalamus | ACAGCACAGC (4) GGTAAGTTTT (2)
| 3.6 | 0.0036 |
| E12.5 retina | AGCTCTGGGG (2) GAAAGTACTC (2)
| 5.7 | 0.0057 |
| E14.5 retina | AGCTCTGGGG (2) GGTAAGTTTT (2)
| 5.4 | 0.0054 |
| E16.5 retina | ACAGCACAGC (4)
| 1.8 | 0.0018 |
| E18.5 retina | GGTAAGTTTT (2)
| 1.8 | 0.0018 |
| P0.5 retina | ACAGCACAGC (4) AGCTCTGGGG (2) GAAAGTACTC (2) GGTAAGTTTT (2)
| 8 | 0.008 |
| P2.5 retina | AAACTGAAGC (2) GAAAGTACTC (2) GAGAGAAACA (3) GGTAAGTTTT (2)
| 7.2 | 0.0072 |
| P4.5 retina | AGCTCTGGGG (2) GAAAGTACTC (2) GGTAAGTTTT (2) TGAGGATCGA (2)
| 12 | 0.012 |
| P6.5 retina | AGCTCTGGGG (2)
| 3.3 | 0.0033 |
| P10.5 crx- retina | GAAAGTACTC (2) GGTAAGTTTT (2)
| 9.3 | 0.0093 |
| P10.5 crx+ retina | ACAGCACAGC (4) AGCTCTGGGG (2) GAAAGTACTC (2)
| 15.3 | 0.0153 |
| Adult retinal | ACAGCACAGC (4) AGCTCTGGGG (2) GAAAGTACTC (2) GGTAAGTTTT (2)
| 11.2 | 0.0112 |
| ONL | GAAAGTACTC (2) GAGAGAAACA (3)
| 7.6 | 0.0076 |