Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.238817	Rpl38	ribosomal protein L38	11		67671
Gene Ontology	cytosolic large ribosomal subunit (sensu Eukarya) | intracellular | protein biosynthesis | ribosome | RNA binding | structural constituent of ribosome
Human Homolog	RPL38[ribosomal protein L38]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTCGGAAAA (4) 35.9 0.0359 P8 Cb GC GGCTGCTCTG (7) 22.8 0.0228 P8 Cb GC GCGACGCGGG (6) 9.8 0.0098 P8 Cb GC CTTCACCTTC (3) 1.6 0.0016 P8 Cb GC CTTTGGGAAA (4) 1.6 0.0016 Cb medulloblastoma CCTCGGAAAA (4) 18.5 0.0185 Cb medulloblastoma GCGACGCGGG (6) 2.3 0.0023 Cb medulloblastoma GGCTGCTCTG (7) 2.3 0.0023 P8 GC+1d culture CCTCGGAAAA (4) 29.7 0.0297 P8 GC+1d culture GGCTGCTCTG (7) 11.4 0.0114 P8 GC+1d culture GCGACGCGGG (6) 2.3 0.0023 P8 GC+SHH+1d culture CCTCGGAAAA (4) 26.9 0.0269 P8 GC+SHH+1d culture GGCTGCTCTG (7) 18.7 0.0187 P8 GC+SHH+1d culture GCGACGCGGG (6) 15.2 0.0152 P8 GC+SHH+1d culture CTTCACCTTC (3) 2.3 0.0023 3T3 fibroblasts CCTCGGAAAA (4) 70.1 0.0701 3T3 fibroblasts GGCTGCTCTG (7) 35 0.035 3T3 fibroblasts GCGACGCGGG (6) 7 0.007 E15 cortex CCTCGGAAAA (4) 79.2 0.0792 E15 cortex GGCTGCTCTG (7) 49.5 0.0495 P1 cortex CCTCGGAAAA (4) 27.3 0.0273 P1 cortex GCGACGCGGG (6) 9.1 0.0091 Hypothalamus GCGACGCGGG (6) 16.3 0.0163 Hypothalamus CCTCGGAAAA (4) 12.7 0.0127 Hypothalamus GGCTGCTCTG (7) 7.2 0.0072 Hypothalamus CTTCACCTTC (3) 3.6 0.0036 E12.5 retina CCTCGGAAAA (4) 48.8 0.0488 E12.5 retina GGCTGCTCTG (7) 30 0.03 E12.5 retina GCGACGCGGG (6) 7.5 0.0075 E12.5 retina CTTCACCTTC (3) 3.8 0.0038 E14.5 retina GGCTGCTCTG (7) 51 0.051 E14.5 retina GCGACGCGGG (6) 5.5 0.0055 E14.5 retina CCTCGGAAAA (4) 1.8 0.0018 E16.5 retina GGCTGCTCTG (7) 41.7 0.0417 E16.5 retina CCTCGGAAAA (4) 3.6 0.0036 E16.5 retina GCGACGCGGG (6) 3.6 0.0036 E16.5 retina CTTTGGGAAA (4) 1.8 0.0018 E18.5 retina GGCTGCTCTG (7) 23.6 0.0236 E18.5 retina CCTCGGAAAA (4) 16.4 0.0164 E18.5 retina GCGACGCGGG (6) 16.4 0.0164 P0.5 retina CCTCGGAAAA (4) 47.1 0.0471 P0.5 retina GGCTGCTCTG (7) 21.6 0.0216 P0.5 retina GCGACGCGGG (6) 11.8 0.0118 P2.5 retina CCTCGGAAAA (4) 22.9 0.0229 P2.5 retina GGCTGCTCTG (7) 21.1 0.0211 P2.5 retina GCGACGCGGG (6) 7 0.007 P4.5 retina GGCTGCTCTG (7) 23.8 0.0238 P4.5 retina CCTCGGAAAA (4) 15.9 0.0159 P4.5 retina GCGACGCGGG (6) 15.9 0.0159 P6.5 retina GGCTGCTCTG (7) 30 0.03 P6.5 retina CCTCGGAAAA (4) 16.7 0.0167 P6.5 retina GCGACGCGGG (6) 8.3 0.0083 P10.5 crx- retina GGCTGCTCTG (7) 11.1 0.0111 P10.5 crx- retina CCTCGGAAAA (4) 9.3 0.0093 P10.5 crx- retina GCGACGCGGG (6) 1.9 0.0019 P10.5 crx+ retina GGCTGCTCTG (7) 25 0.025 P10.5 crx+ retina GCGACGCGGG (6) 7.7 0.0077 P10.5 crx+ retina CCTCGGAAAA (4) 5.8 0.0058 Adult retinal CCTCGGAAAA (4) 14.8 0.0148 Adult retinal GGCTGCTCTG (7) 11.1 0.0111 Adult retinal GCGACGCGGG (6) 1.9 0.0019 ONL CCTCGGAAAA (4) 23 0.023 ONL GGCTGCTCTG (7) 7.7 0.0077 ONL GCGACGCGGG (6) 5.7 0.0057 ONL CTTCACCTTC (3) 1.9 0.0019