Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.239470	Abca3	ATP-binding cassette, sub-family A (ABC1), member 3	17		27410
Gene Ontology	ATP binding | ATPase activity, coupled to transmembrane movement of substances | integral to membrane | integral to plasma membrane | membrane | nucleotide binding | transport | transport
Human Homolog	ABCA3[ATP-binding cassette, sub-family A (ABC1), member 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 68 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC AAAAACAATC (5) 1.6 0.0016 P8 Cb GC GAACTGGAGT (6) 1.6 0.0016 P8 Cb GC GACGAAGCTG (2) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma ACCAAAAAAA (6) 78.6 0.0786 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture ACCAAAAAAA (6) 1.2 0.0012 P8 GC+SHH+1d culture GACGAAGCTG (2) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts TGTTCTTGGT (4) 10.5 0.0105 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex ACCAAAAAAA (6) 9.1 0.0091 P1 cortex GACGAAGCTG (2) 9.1 0.0091 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus ACCAAAAAAA (6) 43.5 0.0435 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina AAAAACAATC (5) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina AAAAACAATC (5) 1.8 0.0018 E14.5 retina ACCAAAAAAA (6) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina AAAAACAATC (5) 14.5 0.0145 E16.5 retina ACCAAAAAAA (6) 1.8 0.0018 E16.5 retina GAACTGGAGT (6) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina ACCAAAAAAA (6) 3.6 0.0036 E18.5 retina AAAAACAATC (5) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina ACCAAAAAAA (6) 5.9 0.0059 P0.5 retina AAAAACAATC (5) 2 0.002 P0.5 retina GAACTGGAGT (6) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina AAAAACAATC (5) 5 0.005 P6.5 retina ACCAAAAAAA (6) 3.3 0.0033 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina AAAAACAATC (5) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina ACCAAAAAAA (6) 3.8 0.0038 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal ACCAAAAAAA (6) 7.4 0.0074 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL AAAAACAATC (5) 3.8 0.0038 ONL GAACTGGAGT (6) 3.8 0.0038 ONL ACCAAAAAAA (6) 1.9 0.0019