| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCAAAGATGT (2) TAATAGCTAA TAATAGCTAG
| 31 | 0.031 |
| Cb medulloblastoma | GCAAAGATGT (2) TAATAGCTAG
| 13.9 | 0.0139 |
| P8 GC+1d culture | GCAAAGATGT (2) TAATAGCTAA TAATAGCTAG
| 47.9 | 0.0479 |
| P8 GC+SHH+1d culture | TAATAGCTAA TAATAGCTAG TCGGGCCGGG
| 34 | 0.034 |
| 3T3 fibroblasts | TAATAGCTAG
| 10.5 | 0.0105 |
| E15 cortex | TAATAGCTAG TCGGGCCGGG
| 19.7 | 0.0197 |
| P1 cortex | TAATAGCTAG TGATAGCTAG (2)
| 54.5 | 0.0545 |
| Hypothalamus | TAATAGCTAG
| 48.9 | 0.0489 |
| E12.5 retina | GCAAAGATGT (2) TAATAGCTAG
| 30.1 | 0.0301 |
| E14.5 retina | GCAAAGATGT (2) TAATAGCTAA TAATAGCTAG TAATAGCTGG (2)
| 49.1 | 0.0491 |
| E16.5 retina | GCAAAGATGT (2) TAATAGCTAG
| 77.9 | 0.0779 |
| E18.5 retina | GCAAAGATGT (2) TAATAGCTAG
| 70.9 | 0.0709 |
| P0.5 retina | GCAAAGATGT (2) TAATAGCTAA TAATAGCTAG TCGGGCCGGG
| 62.8 | 0.0628 |
| P2.5 retina | GCAAAGATGT (2) TAATAGCTAG TCGGGCCGGG
| 82.8 | 0.0828 |
| P4.5 retina | TAATAGCTAG TGATAGCTAG (2)
| 138.7 | 0.1387 |
| P6.5 retina | GCAAAGATGT (2) TAATAGCTAG
| 150.1 | 0.1501 |
| P10.5 crx- retina | GCAAAGATGT (2) TAATAGCTAA TAATAGCTAG TCGGGCCGGG TGATAGCTAG (2)
| 238 | 0.238 |
| P10.5 crx+ retina | GCAAAGATGT (2) TAATAGCTAG TCGGGCCGGG
| 213.3 | 0.2133 |
| Adult retinal | GCAAAGATGT (2) TAATAGCTAG TGATAGCTAG (2)
| 148.2 | 0.1482 |
| ONL | GCAAAGATGT (2) TAATAGCTAA TAATAGCTAG TAATAGCTGG (2) TCGGGCCGGG
| 291.1 | 0.2911 |