Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.239865	Hspa4	heat shock protein 4	11	11 29.0 cM	15525
Gene Ontology	ATP binding | protein folding | response to heat | response to unfolded protein
Human Homolog	HSPA4[heat shock 70kDa protein 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 43 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGACAAAGTT 9.8 0.0098 P8 Cb GC CTGAGCAGAA (2) 4.9 0.0049 P8 Cb GC AGTGTTTATG (2) 3.3 0.0033 Cb medulloblastoma AGACAAAGTT 23.1 0.0231 Cb medulloblastoma CTGAGCAGAA (2) 4.6 0.0046 P8 GC+1d culture AGACAAAGTT 8 0.008 P8 GC+1d culture CTGAGCAGAA (2) 5.7 0.0057 P8 GC+SHH+1d culture AGACAAAGTT 10.5 0.0105 P8 GC+SHH+1d culture CTGAGCAGAA (2) 5.9 0.0059 P8 GC+SHH+1d culture TTAACTGTTT 2.3 0.0023 3T3 fibroblasts CTGAGCAGAA (2) 3.5 0.0035 E15 cortex AGACAAAGTT 4.9 0.0049 Hypothalamus AGACAAAGTT 18.1 0.0181 Hypothalamus CTGAGCAGAA (2) 1.8 0.0018 E12.5 retina CTGAGCAGAA (2) 7.5 0.0075 E12.5 retina AGACAAAGTT 3.8 0.0038 E12.5 retina TTAACTGTTT 1.9 0.0019 E14.5 retina AGACAAAGTT 10.9 0.0109 E16.5 retina AGACAAAGTT 10.9 0.0109 E16.5 retina CTGAGCAGAA (2) 1.8 0.0018 E18.5 retina AGACAAAGTT 9.1 0.0091 E18.5 retina CTGAGCAGAA (2) 3.6 0.0036 E18.5 retina TTAACTGTTT 1.8 0.0018 P0.5 retina AGACAAAGTT 3.9 0.0039 P0.5 retina CTGAGCAGAA (2) 3.9 0.0039 P0.5 retina AGTGTTTATG (2) 2 0.002 P2.5 retina CTGAGCAGAA (2) 7 0.007 P2.5 retina AGACAAAGTT 1.8 0.0018 P4.5 retina AGACAAAGTT 21.8 0.0218 P4.5 retina AGTGTTTATG (2) 2 0.002 P6.5 retina AGACAAAGTT 8.3 0.0083 P6.5 retina CTGAGCAGAA (2) 5 0.005 P6.5 retina GTTGAACCCT 1.7 0.0017 P10.5 crx- retina AGACAAAGTT 5.6 0.0056 P10.5 crx- retina CTGAGCAGAA (2) 1.9 0.0019 P10.5 crx+ retina AGACAAAGTT 13.5 0.0135 P10.5 crx+ retina GTTGAACCCT 1.9 0.0019 Adult retinal AGACAAAGTT 5.6 0.0056 Adult retinal CTGAGCAGAA (2) 1.9 0.0019 Adult retinal GTTGAACCCT 1.9 0.0019 ONL AGACAAAGTT 5.7 0.0057 ONL CTGAGCAGAA (2) 3.8 0.0038 ONL TTAACTGTTT 1.9 0.0019