Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.240044
Ube2i
ubiquitin-conjugating enzyme E2I
17
22196
Mm.240044
F830028O17Rik
RIKEN cDNA F830028O17 gene
17
320071
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 172 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGCCTCATT
(
3
)
14.7
0.0147
P8 Cb GC
TCCTTCCTTC (
5
)
11.4
0.0114
P8 Cb GC
CCTGTAATCC (
34
)
6.5
0.0065
P8 Cb GC
GGAAGGAGGG (
7
)
4.9
0.0049
P8 Cb GC
CTAGACAGCA
(
4
)
3.3
0.0033
P8 Cb GC
GGAAGGAGGC
(
3
)
3.3
0.0033
P8 Cb GC
AAAAAAAATA (
12
)
1.6
0.0016
P8 Cb GC
ACGAGGAAGG
(
2
)
1.6
0.0016
P8 Cb GC
CCTGCATCCG
(
2
)
1.6
0.0016
P8 Cb GC
CTGGGATACC
(
4
)
1.6
0.0016
P8 Cb GC
CTTCCCACTA (
4
)
1.6
0.0016
P8 Cb GC
CTTCCCACTG
(
3
)
1.6
0.0016
P8 Cb GC
TATATTTTTT (
7
)
1.6
0.0016
P8 Cb GC
TCTGTGAGCG (
3
)
1.6
0.0016
P8 Cb GC
TTCACAAAGA
(
4
)
1.6
0.0016
Cb medulloblastoma
GGAAGGAGGG (
7
)
13.9
0.0139
Cb medulloblastoma
CCTGTAATCC (
34
)
11.6
0.0116
Cb medulloblastoma
AAGCCTCATT
(
3
)
9.2
0.0092
Cb medulloblastoma
AAAAAAAATA (
12
)
4.6
0.0046
Cb medulloblastoma
TCCTTCCTTC (
5
)
4.6
0.0046
Cb medulloblastoma
GGGTCAGAAG
(
4
)
2.3
0.0023
P8 GC+1d culture
AAGCCTCATT
(
3
)
10.3
0.0103
P8 GC+1d culture
CTTCCCACTG
(
3
)
9.1
0.0091
P8 GC+1d culture
TCCTTCCTTC (
5
)
5.7
0.0057
P8 GC+1d culture
ACGAGGAAGG
(
2
)
3.4
0.0034
P8 GC+1d culture
ACCTCCATTG (
2
)
2.3
0.0023
P8 GC+1d culture
GAGCCCAGGG
(
4
)
2.3
0.0023
P8 GC+1d culture
GGAAGGAGGG (
7
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAATA (
12
)
1.1
0.0011
P8 GC+1d culture
CCTGTAATCC (
34
)
1.1
0.0011
P8 GC+1d culture
CTAGACAGCA
(
4
)
1.1
0.0011
P8 GC+1d culture
GGAAGGAGGC
(
3
)
1.1
0.0011
P8 GC+1d culture
GGGAAGGAGG (
6
)
1.1
0.0011
P8 GC+1d culture
GGGTCAGAAG
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
AAGCCTCATT
(
3
)
15.2
0.0152
P8 GC+SHH+1d culture
CTTCCCACTG
(
3
)
15.2
0.0152
P8 GC+SHH+1d culture
ACGAGGAAGG
(
2
)
7
0.007
P8 GC+SHH+1d culture
TCCTTCCTTC (
5
)
7
0.007
P8 GC+SHH+1d culture
CCTGTAATCC (
34
)
4.7
0.0047
P8 GC+SHH+1d culture
CCTGCATCCG
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
CTAGACAGCA
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GGGTCAGAAG
(
4
)
1.2
0.0012
3T3 fibroblasts
CCTGTAATCC (
34
)
10.5
0.0105
3T3 fibroblasts
CTTCCCACTG
(
3
)
7
0.007
3T3 fibroblasts
GAGCCCAGGG
(
4
)
7
0.007
3T3 fibroblasts
ACCTCCATTG (
2
)
3.5
0.0035
3T3 fibroblasts
ACGAGGAAGG
(
2
)
3.5
0.0035
3T3 fibroblasts
CAGTAACTCA
(
3
)
3.5
0.0035
3T3 fibroblasts
GGAAGGAGGG (
7
)
3.5
0.0035
E15 cortex
AAGCCTCATT
(
3
)
9.9
0.0099
E15 cortex
ACGAGGAAGG
(
2
)
9.9
0.0099
E15 cortex
GGAAGGAGGG (
7
)
9.9
0.0099
E15 cortex
CAGTAACTCA
(
3
)
4.9
0.0049
E15 cortex
CCTGTAATCC (
34
)
4.9
0.0049
E15 cortex
CTTCCCACTG
(
3
)
4.9
0.0049
P1 cortex
AAGCCTCATT
(
3
)
22.7
0.0227
P1 cortex
CCTGTAATCC (
34
)
13.6
0.0136
P1 cortex
CAGTAACTCA
(
3
)
4.5
0.0045
P1 cortex
CTTCCCACTA (
4
)
4.5
0.0045
P1 cortex
GGAAGGAGGG (
7
)
4.5
0.0045
Hypothalamus
TCCTTCCTTC (
5
)
12.7
0.0127
Hypothalamus
AAGCCTCATT
(
3
)
9.1
0.0091
Hypothalamus
GGGTCAGAAG
(
4
)
9.1
0.0091
Hypothalamus
CCTGTAATCC (
34
)
5.4
0.0054
Hypothalamus
GGAAGGAGGG (
7
)
5.4
0.0054
Hypothalamus
ACGAGGAAGG
(
2
)
3.6
0.0036
Hypothalamus
CCTGCATCCG
(
2
)
1.8
0.0018
E12.5 retina
AAGCCTCATT
(
3
)
37.5
0.0375
E12.5 retina
ACGAGGAAGG
(
2
)
5.6
0.0056
E12.5 retina
GGAAGGAGGG (
7
)
5.6
0.0056
E12.5 retina
TCCTTCCTTC (
5
)
5.6
0.0056
E12.5 retina
CCTGTAATCC (
34
)
3.8
0.0038
E12.5 retina
CTAGACAGCA
(
4
)
3.8
0.0038
E12.5 retina
CTGGGATACC
(
4
)
1.9
0.0019
E12.5 retina
CTTCCCACTG
(
3
)
1.9
0.0019
E12.5 retina
GAGCCCAGGG
(
4
)
1.9
0.0019
E14.5 retina
AAGCCTCATT
(
3
)
32.8
0.0328
E14.5 retina
CCTGTAATCC (
34
)
5.5
0.0055
E14.5 retina
TCCTTCCTTC (
5
)
5.5
0.0055
E14.5 retina
GAGCCCAGGG
(
4
)
3.6
0.0036
E14.5 retina
GGAAGGAGGG (
7
)
3.6
0.0036
E14.5 retina
CCTGCATCCG
(
2
)
1.8
0.0018
E14.5 retina
CTGGGATACC
(
4
)
1.8
0.0018
E14.5 retina
GGGAAGGAGG (
6
)
1.8
0.0018
E14.5 retina
TATATTTTTT (
7
)
1.8
0.0018
E16.5 retina
AAGCCTCATT
(
3
)
12.7
0.0127
E16.5 retina
TCCTTCCTTC (
5
)
10.9
0.0109
E16.5 retina
ACCTCCATTG (
2
)
3.6
0.0036
E16.5 retina
ACGAGGAAGG
(
2
)
3.6
0.0036
E16.5 retina
CCTGTAATCC (
34
)
3.6
0.0036
E16.5 retina
CTTCCCACTG
(
3
)
3.6
0.0036
E16.5 retina
GGAAGGAGGG (
7
)
3.6
0.0036
E16.5 retina
TCTGTGAGCG (
3
)
3.6
0.0036
E16.5 retina
AAAAAAAATA (
12
)
1.8
0.0018
E16.5 retina
CTGGGATACC
(
4
)
1.8
0.0018
E16.5 retina
GGAAGGAGGC
(
3
)
1.8
0.0018
E18.5 retina
AAGCCTCATT
(
3
)
18.2
0.0182
E18.5 retina
TCCTTCCTTC (
5
)
12.7
0.0127
E18.5 retina
GGAAGGAGGG (
7
)
9.1
0.0091
E18.5 retina
ACGAGGAAGG
(
2
)
7.3
0.0073
E18.5 retina
AAAAAAAATA (
12
)
3.6
0.0036
E18.5 retina
CTTCCCACTG
(
3
)
3.6
0.0036
E18.5 retina
TTCACAAAGA
(
4
)
3.6
0.0036
E18.5 retina
CCTGCATCCG
(
2
)
1.8
0.0018
E18.5 retina
CCTGTAATCC (
34
)
1.8
0.0018
E18.5 retina
TATATTTTTT (
7
)
1.8
0.0018
P0.5 retina
CTTCCCACTG
(
3
)
23.6
0.0236
P0.5 retina
AAGCCTCATT
(
3
)
9.8
0.0098
P0.5 retina
GGAAGGAGGG (
7
)
5.9
0.0059
P0.5 retina
CCTGTAATCC (
34
)
3.9
0.0039
P0.5 retina
TCCTTCCTTC (
5
)
3.9
0.0039
P0.5 retina
GGAAACCAGG (
3
)
2
0.002
P0.5 retina
GGGTCAGAAG
(
4
)
2
0.002
P2.5 retina
AAGCCTCATT
(
3
)
28.2
0.0282
P2.5 retina
GGAAGGAGGG (
7
)
12.3
0.0123
P2.5 retina
ACGAGGAAGG
(
2
)
7
0.007
P2.5 retina
CCTGTAATCC (
34
)
3.5
0.0035
P2.5 retina
CTAGACAGCA
(
4
)
3.5
0.0035
P2.5 retina
CTTCCCACTG
(
3
)
3.5
0.0035
P2.5 retina
TCCTTCCTTC (
5
)
3.5
0.0035
P2.5 retina
CAGTAACTCA
(
3
)
1.8
0.0018
P2.5 retina
GGGAAGGAGG (
6
)
1.8
0.0018
P2.5 retina
GGGTCAGAAG
(
4
)
1.8
0.0018
P4.5 retina
GGAAGGAGGG (
7
)
27.7
0.0277
P4.5 retina
AAGCCTCATT
(
3
)
9.9
0.0099
P4.5 retina
TCCTTCCTTC (
5
)
7.9
0.0079
P4.5 retina
AAAAAAAATA (
12
)
5.9
0.0059
P4.5 retina
CCTGTAATCC (
34
)
5.9
0.0059
P4.5 retina
CTTCCCACTG
(
3
)
4
0.004
P4.5 retina
GGAAGGAGGC
(
3
)
4
0.004
P6.5 retina
AAGCCTCATT
(
3
)
33.3
0.0333
P6.5 retina
GGAAGGAGGG (
7
)
15
0.015
P6.5 retina
ACGAGGAAGG
(
2
)
5
0.005
P6.5 retina
CTAGACAGCA
(
4
)
3.3
0.0033
P6.5 retina
CTTCCCACTG
(
3
)
3.3
0.0033
P6.5 retina
TCCTTCCTTC (
5
)
3.3
0.0033
P6.5 retina
TGACACCAGT
(
2
)
3.3
0.0033
P6.5 retina
CCTGCATCCG
(
2
)
1.7
0.0017
P6.5 retina
CCTGTAATCC (
34
)
1.7
0.0017
P6.5 retina
GAGCCCAGGG
(
4
)
1.7
0.0017
P10.5 crx- retina
AAGCCTCATT
(
3
)
37.2
0.0372
P10.5 crx- retina
GGAAGGAGGG (
7
)
5.6
0.0056
P10.5 crx- retina
TCCTTCCTTC (
5
)
5.6
0.0056
P10.5 crx- retina
CCTGTAATCC (
34
)
3.7
0.0037
P10.5 crx- retina
GGAAACCAGG (
3
)
3.7
0.0037
P10.5 crx- retina
ACGAGGAAGG
(
2
)
1.9
0.0019
P10.5 crx- retina
CTAGACAGCA
(
4
)
1.9
0.0019
P10.5 crx- retina
CTTCCCACTG
(
3
)
1.9
0.0019
P10.5 crx- retina
GAGCCCAGGG
(
4
)
1.9
0.0019
P10.5 crx+ retina
GGAAGGAGGG (
7
)
19.2
0.0192
P10.5 crx+ retina
AAGCCTCATT
(
3
)
13.5
0.0135
P10.5 crx+ retina
TCCTTCCTTC (
5
)
9.6
0.0096
P10.5 crx+ retina
CCTGTAATCC (
34
)
3.8
0.0038
P10.5 crx+ retina
ACGAGGAAGG
(
2
)
1.9
0.0019
P10.5 crx+ retina
CCTGCATCCG
(
2
)
1.9
0.0019
P10.5 crx+ retina
CTGGGATACC
(
4
)
1.9
0.0019
P10.5 crx+ retina
GGGAAGGAGG (
6
)
1.9
0.0019
P10.5 crx+ retina
GGGTCAGAAG
(
4
)
1.9
0.0019
Adult retinal
AAGCCTCATT
(
3
)
9.3
0.0093
Adult retinal
CCTGCATCCG
(
2
)
7.4
0.0074
Adult retinal
GGAAGGAGGG (
7
)
7.4
0.0074
Adult retinal
CTTCCCACTG
(
3
)
5.6
0.0056
Adult retinal
CCTGTAATCC (
34
)
3.7
0.0037
Adult retinal
GGGTCAGAAG
(
4
)
1.9
0.0019
ONL
AAGCCTCATT
(
3
)
11.5
0.0115
ONL
GGAAGGAGGG (
7
)
7.7
0.0077
ONL
AAAAAAAATA (
12
)
5.7
0.0057
ONL
ACGAGGAAGG
(
2
)
3.8
0.0038
ONL
CCTGTAATCC (
34
)
3.8
0.0038
ONL
CTTCCCACTA (
4
)
1.9
0.0019
ONL
CTTCCCACTG
(
3
)
1.9
0.0019
ONL
TGACACCAGT
(
2
)
1.9
0.0019
