Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.240265
5830415L20Rik
RIKEN cDNA 5830415L20 gene
5
68152
Human Homolog
MGC40405[hypothetical protein MGC40405]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 22 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGAAAGCCCC
(
3
)
CTAAATATCT
(
2
)
3.2
0.0032
Cb medulloblastoma
TTTTAAAAGT
(
2
)
4.6
0.0046
P8 GC+1d culture
CTAAATATCT
(
2
)
5.7
0.0057
P8 GC+SHH+1d culture
AGAAAGCCCC
(
3
)
CTAAATATCT
(
2
)
5.9
0.0059
P1 cortex
TTTTAAAAGT
(
2
)
4.5
0.0045
Hypothalamus
TAAAAAGCAA
1.8
0.0018
E16.5 retina
AATCCAATAG
1.8
0.0018
E18.5 retina
AGAAAGCCCC
(
3
)
TAAAAAGCAA
TTTTAAAAGT
(
2
)
5.4
0.0054
P2.5 retina
AATCCAATAG
CTAAATATCT
(
2
)
TAAAAAGCAA
5.4
0.0054
P4.5 retina
CTAAATATCT
(
2
)
TTTTAAAAGT
(
2
)
6
0.006
P6.5 retina
TTTTAAAAGT
(
2
)
3.3
0.0033
P10.5 crx- retina
AATCCAATAG
1.9
0.0019
P10.5 crx+ retina
TAAAAAGCAA
TTTTAAAAGT
(
2
)
3.8
0.0038
Adult retinal
CTAAATATCT
(
2
)
1.9
0.0019
