Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.24035
D16Ertd480e
DNA segment, Chr 16, ERATO Doi 480, expressed
16
16 28.9 cM
212514
Human Homolog
LOC152185[hypothetical protein AY099107]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 37 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAAACTCTCA (
2
)
24.5
0.0245
P8 Cb GC
GAGGCGCGCA
(
2
)
1.6
0.0016
Cb medulloblastoma
CAAACTCTCA (
2
)
117.9
0.1179
P8 GC+1d culture
CAAACTCTCA (
2
)
41.1
0.0411
P8 GC+1d culture
GAGGCGCGCA
(
2
)
1.1
0.0011
P8 GC+1d culture
GGAGAAGACC
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
CAAACTCTCA (
2
)
37.5
0.0375
P8 GC+SHH+1d culture
GAGGCGCGCA
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
GGAGAAGACC
(
6
)
1.2
0.0012
3T3 fibroblasts
CAAACTCTCA (
2
)
133.2
0.1332
3T3 fibroblasts
GAGGCGCGCA
(
2
)
7
0.007
E15 cortex
CAAACTCTCA (
2
)
19.8
0.0198
E15 cortex
GAGGCGCGCA
(
2
)
9.9
0.0099
P1 cortex
CAAACTCTCA (
2
)
18.2
0.0182
P1 cortex
GAGGCGCGCA
(
2
)
4.5
0.0045
Hypothalamus
CAAACTCTCA (
2
)
233.6
0.2336
E12.5 retina
CAAACTCTCA (
2
)
63.8
0.0638
E12.5 retina
GAGGCGCGCA
(
2
)
1.9
0.0019
E14.5 retina
CAAACTCTCA (
2
)
18.2
0.0182
E14.5 retina
GAGGCGCGCA
(
2
)
1.8
0.0018
E16.5 retina
CAAACTCTCA (
2
)
21.7
0.0217
E16.5 retina
GAGGCGCGCA
(
2
)
1.8
0.0018
E18.5 retina
CAAACTCTCA (
2
)
10.9
0.0109
P0.5 retina
CAAACTCTCA (
2
)
9.8
0.0098
P0.5 retina
GAGGCGCGCA
(
2
)
2
0.002
P2.5 retina
CAAACTCTCA (
2
)
22.9
0.0229
P2.5 retina
GGAGAAGACC
(
6
)
1.8
0.0018
P4.5 retina
CAAACTCTCA (
2
)
39.6
0.0396
P6.5 retina
CAAACTCTCA (
2
)
58.4
0.0584
P6.5 retina
GAGGCGCGCA
(
2
)
1.7
0.0017
P10.5 crx- retina
CAAACTCTCA (
2
)
83.6
0.0836
P10.5 crx+ retina
CAAACTCTCA (
2
)
115.3
0.1153
P10.5 crx+ retina
GAGGCGCGCA
(
2
)
3.8
0.0038
Adult retinal
CAAACTCTCA (
2
)
18.5
0.0185
Adult retinal
GAGGCGCGCA
(
2
)
7.4
0.0074
ONL
CAAACTCTCA (
2
)
3.8
0.0038
ONL
GAGGCGCGCA
(
2
)
3.8
0.0038
