Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.240396	Ppp2r5c	protein phosphatase 2, regulatory subunit B (B56), gamma isoform	12	12 F2	26931
Mm.240396	C76872	expressed sequence C76872	12		97787
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 15 In Situ Hybridization Images

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SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGTTAAAATA (9) 4.9 0.0049 P8 Cb GC TGAATTTTAA (2) 3.3 0.0033 P8 Cb GC CTTTGGGGAA (7) 1.6 0.0016 P8 Cb GC GGTGAGCTGC (4) 1.6 0.0016 Cb medulloblastoma TGAATTTTAA (2) 9.2 0.0092 Cb medulloblastoma CAGATCTGGG (4) 2.3 0.0023 Cb medulloblastoma GGTTAAAATA (9) 2.3 0.0023 Cb medulloblastoma TCAACATCTA (3) 2.3 0.0023 P8 GC+1d culture TGAATTTTAA (2) 5.7 0.0057 P8 GC+1d culture GGTTAAAATA (9) 2.3 0.0023 P8 GC+1d culture TCAACATCTA (3) 2.3 0.0023 P8 GC+1d culture AGAGGGATGG (2) 1.1 0.0011 P8 GC+1d culture CGCGCACACA (11) 1.1 0.0011 P8 GC+1d culture CTAATTGTTC (2) 1.1 0.0011 P8 GC+SHH+1d culture GGTTAAAATA (9) 3.5 0.0035 P8 GC+SHH+1d culture TGAATTTTAA (2) 3.5 0.0035 P8 GC+SHH+1d culture CTTGTTTATG (3) 2.3 0.0023 P8 GC+SHH+1d culture TCAACATCTA (3) 2.3 0.0023 P8 GC+SHH+1d culture ACTAGGCACA (2) 1.2 0.0012 P8 GC+SHH+1d culture AGAGGGATGG (2) 1.2 0.0012 P8 GC+SHH+1d culture CTAATTGTTC (2) 1.2 0.0012 3T3 fibroblasts TGCAGGGAGG (3) 7 0.007 3T3 fibroblasts CGCGCACACA (11) 3.5 0.0035 3T3 fibroblasts GGTTAAAATA (9) 3.5 0.0035 E15 cortex CAGATCTGGG (4) 4.9 0.0049 E15 cortex CTTTGGGGAA (7) 4.9 0.0049 E15 cortex GGTGAGCTGC (4) 4.9 0.0049 E15 cortex TCAACATCTA (3) 4.9 0.0049 E15 cortex TGAATTTTAA (2) 4.9 0.0049 E15 cortex TGCAGGGAGG (3) 4.9 0.0049 P1 cortex AGAGGGATGG (2) 4.5 0.0045 P1 cortex TCAACATCTA (3) 4.5 0.0045 Hypothalamus TGAATTTTAA (2) 5.4 0.0054 Hypothalamus CGCGCACACA (11) 3.6 0.0036 Hypothalamus AAGTCTTTCT (5) 1.8 0.0018 Hypothalamus CAGATCTGGG (4) 1.8 0.0018 Hypothalamus TGCAGGGAGG (3) 1.8 0.0018 E12.5 retina TCAACATCTA (3) 11.3 0.0113 E12.5 retina AAGTCTTTCT (5) 1.9 0.0019 E12.5 retina CTAATTGTTC (2) 1.9 0.0019 E12.5 retina GGTTAAAATA (9) 1.9 0.0019 E14.5 retina CGCGCACACA (11) 1.8 0.0018 E14.5 retina GGTTAAAATA (9) 1.8 0.0018 E16.5 retina TCAACATCTA (3) 3.6 0.0036 E16.5 retina GGTTAAAATA (9) 1.8 0.0018 E18.5 retina TGAATTTTAA (2) 7.3 0.0073 E18.5 retina TCAACATCTA (3) 5.5 0.0055 E18.5 retina AAGTCTTTCT (5) 1.8 0.0018 E18.5 retina CGCGCACACA (11) 1.8 0.0018 E18.5 retina CTTGTTTATG (3) 1.8 0.0018 P0.5 retina AGAGGGATGG (2) 5.9 0.0059 P0.5 retina CTTTGGGGAA (7) 2 0.002 P0.5 retina GGTTAAAATA (9) 2 0.002 P2.5 retina GGTTAAAATA (9) 5.3 0.0053 P2.5 retina TCAACATCTA (3) 5.3 0.0053 P2.5 retina AGAGGGATGG (2) 1.8 0.0018 P2.5 retina CGCGCACACA (11) 1.8 0.0018 P2.5 retina TGAATTTTAA (2) 1.8 0.0018 P4.5 retina TCAACATCTA (3) 4 0.004 P4.5 retina AGAGGGATGG (2) 2 0.002 P4.5 retina TGCAGGGAGG (3) 2 0.002 P6.5 retina GGTTAAAATA (9) 3.3 0.0033 P6.5 retina TCAACATCTA (3) 3.3 0.0033 P6.5 retina TGAATTTTAA (2) 1.7 0.0017 P10.5 crx- retina ACTAGGCACA (2) 9.3 0.0093 P10.5 crx- retina GGTTAAAATA (9) 9.3 0.0093 P10.5 crx- retina TGAATTTTAA (2) 7.4 0.0074 P10.5 crx- retina AGAGGGATGG (2) 3.7 0.0037 P10.5 crx- retina CTAATTGTTC (2) 1.9 0.0019 P10.5 crx+ retina TGAATTTTAA (2) 7.7 0.0077 P10.5 crx+ retina AGAGGGATGG (2) 3.8 0.0038 P10.5 crx+ retina ACTAGGCACA (2) 1.9 0.0019 P10.5 crx+ retina CTAATTGTTC (2) 1.9 0.0019 P10.5 crx+ retina CTTTGGGGAA (7) 1.9 0.0019 P10.5 crx+ retina GGTTAAAATA (9) 1.9 0.0019 Adult retinal TGCAGGGAGG (3) 3.7 0.0037 ONL AAGTCTTTCT (5) 1.9 0.0019 ONL AGAGGGATGG (2) 1.9 0.0019 ONL GGTGAGCTGC (4) 1.9 0.0019 ONL TGAATTTTAA (2) 1.9 0.0019