Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.240434	Pdcd8	programmed cell death 8	X	X 17.0 cM	26926
Gene Ontology	apoptosis | apoptotic mitochondrial changes | cytosol | disulfide oxidoreductase activity | DNA fragmentation | electron transport | electron-transferring-flavoprotein dehydrogenase activity | mitochondrial intermembrane space | mitochondrion | nucleus | oxidoreductase activity
Human Homolog	PDCD8[programmed cell death 8 (apoptosis-inducing factor)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 44 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGCTTACA (19) 11.4 0.0114 P8 Cb GC GACACAGAGC (8) 1.6 0.0016 Cb medulloblastoma GTGGCTTACA (19) 23.1 0.0231 Cb medulloblastoma GACACAGAGC (8) 4.6 0.0046 P8 GC+1d culture GTGGCTTACA (19) 30.8 0.0308 P8 GC+1d culture AAGATTGAAT 1.1 0.0011 P8 GC+1d culture GTGAAACTTA (2) 1.1 0.0011 P8 GC+SHH+1d culture GTGGCTTACA (19) 36.3 0.0363 P8 GC+SHH+1d culture AAGATTGAAT 1.2 0.0012 3T3 fibroblasts GTGGCTTACA (19) 35 0.035 E15 cortex GTGGCTTACA (19) 19.8 0.0198 P1 cortex GTGGCTTACA (19) 22.7 0.0227 Hypothalamus GTGGCTTACA (19) 23.5 0.0235 E12.5 retina GTGGCTTACA (19) 43.2 0.0432 E12.5 retina CCGACCTTCC (2) 1.9 0.0019 E14.5 retina GTGGCTTACA (19) 51 0.051 E14.5 retina GGTGAAAACT (4) 1.8 0.0018 E14.5 retina GTGAACCTAA 1.8 0.0018 E16.5 retina GTGGCTTACA (19) 50.7 0.0507 E16.5 retina AAGATTGAAT 1.8 0.0018 E16.5 retina GACACAGAGC (8) 1.8 0.0018 E16.5 retina GGTGAAAACT (4) 1.8 0.0018 E16.5 retina GTGAAACTTA (2) 1.8 0.0018 E18.5 retina GTGGCTTACA (19) 40 0.04 E18.5 retina GTGAACCTAA 5.5 0.0055 P0.5 retina GTGGCTTACA (19) 45.1 0.0451 P0.5 retina GACACAGAGC (8) 2 0.002 P2.5 retina GTGGCTTACA (19) 21.1 0.0211 P2.5 retina GGTGAAAACT (4) 1.8 0.0018 P4.5 retina GTGGCTTACA (19) 25.8 0.0258 P4.5 retina GTGAAACTTA (2) 2 0.002 P6.5 retina GTGGCTTACA (19) 35 0.035 P6.5 retina CCGACCTTCC (2) 1.7 0.0017 P10.5 crx- retina GTGGCTTACA (19) 24.2 0.0242 P10.5 crx+ retina GTGGCTTACA (19) 32.7 0.0327 P10.5 crx+ retina AAGATTGAAT 1.9 0.0019 P10.5 crx+ retina AATGTTAAAA (4) 1.9 0.0019 P10.5 crx+ retina GTGAAACTTA (2) 1.9 0.0019 Adult retinal GTGGCTTACA (19) 18.5 0.0185 Adult retinal AATGTTAAAA (4) 1.9 0.0019 Adult retinal GTGAACCTAA 1.9 0.0019 ONL GTGGCTTACA (19) 30.6 0.0306 ONL AAGATTGAAT 1.9 0.0019 ONL AATGTTAAAA (4) 1.9 0.0019