Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.24056
AI449175
expressed sequence AI449175
8
234362
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 75 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
AAAGAACTCA (
9
)
1.6
0.0016
P8 Cb GC
TGCTACCCTT (
4
)
1.6
0.0016
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
CTTGAATCTA
(
3
)
6.9
0.0069
Cb medulloblastoma
TGCTACCCTT (
4
)
2.3
0.0023
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
TGCTACCCTT (
4
)
3.4
0.0034
P8 GC+1d culture
GGTTTTAACT (
6
)
2.3
0.0023
P8 GC+1d culture
TCCTGCTTCC
(
2
)
2.3
0.0023
P8 GC+1d culture
TCTGCCAGGA
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
GGTTTTAACT (
6
)
3.5
0.0035
P8 GC+SHH+1d culture
TGCTACCCTT (
4
)
3.5
0.0035
P8 GC+SHH+1d culture
CTTGAATCTA
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TCCTGCTTCC
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TGTCTGAAGA (
4
)
1.2
0.0012
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
TGCTACCCTT (
4
)
59.6
0.0596
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
TCTGCCAGGA
(
3
)
4.5
0.0045
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
GGTTTTAACT (
6
)
3.6
0.0036
Hypothalamus
TGCTACCCTT (
4
)
3.6
0.0036
Hypothalamus
CTTGAATCTA
(
3
)
1.8
0.0018
Hypothalamus
TCTGCCAGGA
(
3
)
1.8
0.0018
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
GGTTTTAACT (
6
)
1.9
0.0019
E12.5 retina
TGTCTGAAGA (
4
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
GGTTTTAACT (
6
)
10.9
0.0109
E14.5 retina
CTTGAATCTA
(
3
)
1.8
0.0018
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
GGTTTTAACT (
6
)
5.4
0.0054
E16.5 retina
TCTGCCAGGA
(
3
)
3.6
0.0036
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
CTTGAATCTA
(
3
)
3.6
0.0036
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
CTTGAATCTA
(
3
)
2
0.002
P0.5 retina
TGCTACCCTT (
4
)
2
0.002
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
TGTCTGAAGA (
4
)
7
0.007
P2.5 retina
AAAGAACTCA (
9
)
1.8
0.0018
P2.5 retina
CTTGAATCTA
(
3
)
1.8
0.0018
P2.5 retina
GGAGGGTTTA
1.8
0.0018
P2.5 retina
GGTTTTAACT (
6
)
1.8
0.0018
P2.5 retina
TGCTACCCTT (
4
)
1.8
0.0018
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
GGTTTTAACT (
6
)
4
0.004
P4.5 retina
TCCTGCTTCC
(
2
)
2
0.002
P4.5 retina
TCTGCCAGGA
(
3
)
2
0.002
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
GGAGGGTTTA
5
0.005
P6.5 retina
GGTTTTAACT (
6
)
3.3
0.0033
P6.5 retina
TGCTACCCTT (
4
)
3.3
0.0033
P6.5 retina
TCCTGCTTCC
(
2
)
1.7
0.0017
P6.5 retina
TCTGCCAGGA
(
3
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
TCTGCCAGGA
(
3
)
5.6
0.0056
P10.5 crx- retina
CTTGAATCTA
(
3
)
3.7
0.0037
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
CTTGAATCTA
(
3
)
3.8
0.0038
P10.5 crx+ retina
TCTGCCAGGA
(
3
)
3.8
0.0038
P10.5 crx+ retina
GGTTTTAACT (
6
)
1.9
0.0019
P10.5 crx+ retina
TGTCTGAAGA (
4
)
1.9
0.0019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
TGCTACCCTT (
4
)
1.9
0.0019
Adult retinal
TGTCTGAAGA (
4
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
AAAGAACTCA (
9
)
1.9
0.0019
ONL
GGAGGGTTTA
1.9
0.0019
ONL
GGTTTTAACT (
6
)
1.9
0.0019
ONL
TCTGCCAGGA
(
3
)
1.9
0.0019
ONL
TGTCTGAAGA (
4
)
1.9
0.0019
