Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.240627 Sox4SRY-box containing gene 4 13  13 A3-A5 (13 20.0 cM)  20677 
 Gene Ontology DNA binding | nucleus | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
 Human Homolog SOX4[SRY (sex determining region Y)-box 4]
 Clusters 
   Neighbors    

Total 10 In Situ Hybridization Images

Images -- Click to Enlarge



SAGE Tags

Total 99 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCACAGGCACGA13.10.0131
P8 Cb GCGGGACCTCGT9.80.0098
P8 Cb GCTCCCTGGGCA4.90.0049
P8 Cb GCCCATAGGACT1.60.0016
Cb medulloblastomaACAGGCACGA2.30.0023
P8 GC+1d cultureACAGGCACGA9.10.0091
P8 GC+1d cultureGGGACCTCGT4.60.0046
P8 GC+1d cultureTTATCCTGTC (2)3.40.0034
P8 GC+1d cultureCCATAGGACT2.30.0023
P8 GC+1d cultureCCAATGCTCC1.10.0011
P8 GC+1d cultureTCCCTGGGCA1.10.0011
P8 GC+1d cultureTTTACACTTC1.10.0011
P8 GC+SHH+1d cultureACAGGCACGA10.50.0105
P8 GC+SHH+1d cultureTTTACACTTC3.50.0035
P8 GC+SHH+1d cultureCCAATGCTCC2.30.0023
P8 GC+SHH+1d cultureGGGACCTCGT2.30.0023
P8 GC+SHH+1d cultureCCATAGGACT1.20.0012
P8 GC+SHH+1d cultureTCCCTGGGCA1.20.0012
P8 GC+SHH+1d cultureTTATCCTGTC (2)1.20.0012
3T3 fibroblastsACAGGCACGA280.028
3T3 fibroblastsTCCCTGGGCA17.50.0175
3T3 fibroblastsGGGACCTCGT70.007
3T3 fibroblastsCCAATGCTCC3.50.0035
3T3 fibroblastsTTATCCTGTC (2)3.50.0035
E15 cortexGGGACCTCGT108.90.1089
E15 cortexACAGGCACGA940.094
E15 cortexCCAATGCTCC9.90.0099
E15 cortexTCCCTGGGCA9.90.0099
E15 cortexGAGAAACTCC (2)4.90.0049
E15 cortexTTTACACTTC4.90.0049
P1 cortexACAGGCACGA27.30.0273
P1 cortexGGGACCTCGT18.20.0182
P1 cortexCCATAGGACT9.10.0091
P1 cortexTCCCTGGGCA9.10.0091
P1 cortexTTATCCTGTC (2)4.50.0045
E12.5 retinaGGGACCTCGT7.50.0075
E12.5 retinaTCCCTGGGCA3.80.0038
E12.5 retinaACAGGCACGA1.90.0019
E12.5 retinaCCAATGCTCC1.90.0019
E12.5 retinaGTGATAGCAT1.90.0019
E12.5 retinaTTTACACTTC1.90.0019
E14.5 retinaGGGACCTCGT10.90.0109
E14.5 retinaCCAATGCTCC3.60.0036
E14.5 retinaTCCCTGGGCA3.60.0036
E14.5 retinaACAGGCACGA1.80.0018
E14.5 retinaGAGAAACTCC (2)1.80.0018
E14.5 retinaGTGATAGCAT1.80.0018
E14.5 retinaTTATCCTGTC (2)1.80.0018
E16.5 retinaACAGGCACGA27.20.0272
E16.5 retinaGGGACCTCGT19.90.0199
E16.5 retinaCCAATGCTCC5.40.0054
E16.5 retinaCCATAGGACT3.60.0036
E16.5 retinaTCCCTGGGCA3.60.0036
E16.5 retinaTTATCCTGTC (2)1.80.0018
E18.5 retinaGGGACCTCGT18.20.0182
E18.5 retinaACAGGCACGA9.10.0091
E18.5 retinaCCAATGCTCC3.60.0036
E18.5 retinaCCATAGGACT3.60.0036
E18.5 retinaGTCAAGAAAG3.60.0036
E18.5 retinaGTGATAGCAT1.80.0018
E18.5 retinaTCCCTGGGCA1.80.0018
E18.5 retinaTTATCCTGTC (2)1.80.0018
E18.5 retinaTTTACACTTC1.80.0018
P0.5 retinaGGGACCTCGT31.40.0314
P0.5 retinaACAGGCACGA11.80.0118
P0.5 retinaCCATAGGACT7.90.0079
P0.5 retinaTCCCTGGGCA3.90.0039
P0.5 retinaGTGATAGCAT20.002
P0.5 retinaTTATCCTGTC (2)20.002
P0.5 retinaTTTACACTTC20.002
P2.5 retinaGGGACCTCGT21.10.0211
P2.5 retinaACAGGCACGA8.80.0088
P2.5 retinaTTTACACTTC8.80.0088
P2.5 retinaTCCCTGGGCA70.007
P2.5 retinaCCATAGGACT5.30.0053
P2.5 retinaGTGATAGCAT1.80.0018
P4.5 retinaACAGGCACGA17.80.0178
P4.5 retinaGGGACCTCGT15.90.0159
P4.5 retinaCCAATGCTCC9.90.0099
P4.5 retinaCCATAGGACT5.90.0059
P4.5 retinaTCCCTGGGCA40.004
P4.5 retinaGAGAAACTCC (2)20.002
P4.5 retinaGTCAAGAAAG20.002
P4.5 retinaGTGATAGCAT20.002
P6.5 retinaACAGGCACGA200.02
P6.5 retinaGGGACCTCGT8.30.0083
P6.5 retinaCCATAGGACT3.30.0033
P6.5 retinaGTGATAGCAT3.30.0033
P6.5 retinaTTATCCTGTC (2)3.30.0033
P6.5 retinaTTTACACTTC3.30.0033
P6.5 retinaCCAATGCTCC1.70.0017
P6.5 retinaTCCCTGGGCA1.70.0017
P10.5 crx- retinaACAGGCACGA11.10.0111
P10.5 crx- retinaGGGACCTCGT3.70.0037
P10.5 crx+ retinaACAGGCACGA3.80.0038
P10.5 crx+ retinaCCAATGCTCC3.80.0038
P10.5 crx+ retinaGGGACCTCGT1.90.0019
P10.5 crx+ retinaGTGATAGCAT1.90.0019
ONLGGGACCTCGT1.90.0019