Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.240627 Sox4SRY-box containing gene 4 13  13 A3-A5 (13 20.0 cM)  20677 
 Gene Ontology DNA binding | nucleus | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
 Human Homolog SOX4[SRY (sex determining region Y)-box 4]
 Clusters 
   Neighbors    

Total 10 In Situ Hybridization Images

Images -- Click to Enlarge



SAGE Tags

Total 99 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCACAGGCACGA
CCATAGGACT
GGGACCTCGT
TCCCTGGGCA
29.40.0294
Cb medulloblastomaACAGGCACGA
2.30.0023
P8 GC+1d cultureACAGGCACGA
CCAATGCTCC
CCATAGGACT
GGGACCTCGT
TCCCTGGGCA
TTATCCTGTC (2)
TTTACACTTC
22.70.0227
P8 GC+SHH+1d cultureACAGGCACGA
CCAATGCTCC
CCATAGGACT
GGGACCTCGT
TCCCTGGGCA
TTATCCTGTC (2)
TTTACACTTC
22.20.0222
3T3 fibroblastsACAGGCACGA
CCAATGCTCC
GGGACCTCGT
TCCCTGGGCA
TTATCCTGTC (2)
59.50.0595
E15 cortexACAGGCACGA
CCAATGCTCC
GAGAAACTCC (2)
GGGACCTCGT
TCCCTGGGCA
TTTACACTTC
232.50.2325
P1 cortexACAGGCACGA
CCATAGGACT
GGGACCTCGT
TCCCTGGGCA
TTATCCTGTC (2)
68.20.0682
E12.5 retinaACAGGCACGA
CCAATGCTCC
GGGACCTCGT
GTGATAGCAT
TCCCTGGGCA
TTTACACTTC
18.90.0189
E14.5 retinaACAGGCACGA
CCAATGCTCC
GAGAAACTCC (2)
GGGACCTCGT
GTGATAGCAT
TCCCTGGGCA
TTATCCTGTC (2)
25.30.0253
E16.5 retinaACAGGCACGA
CCAATGCTCC
CCATAGGACT
GGGACCTCGT
TCCCTGGGCA
TTATCCTGTC (2)
61.50.0615
E18.5 retinaACAGGCACGA
CCAATGCTCC
CCATAGGACT
GGGACCTCGT
GTCAAGAAAG
GTGATAGCAT
TCCCTGGGCA
TTATCCTGTC (2)
TTTACACTTC
45.30.0453
P0.5 retinaACAGGCACGA
CCATAGGACT
GGGACCTCGT
GTGATAGCAT
TCCCTGGGCA
TTATCCTGTC (2)
TTTACACTTC
610.061
P2.5 retinaACAGGCACGA
CCATAGGACT
GGGACCTCGT
GTGATAGCAT
TCCCTGGGCA
TTTACACTTC
52.80.0528
P4.5 retinaACAGGCACGA
CCAATGCTCC
CCATAGGACT
GAGAAACTCC (2)
GGGACCTCGT
GTCAAGAAAG
GTGATAGCAT
TCCCTGGGCA
59.50.0595
P6.5 retinaACAGGCACGA
CCAATGCTCC
CCATAGGACT
GGGACCTCGT
GTGATAGCAT
TCCCTGGGCA
TTATCCTGTC (2)
TTTACACTTC
44.90.0449
P10.5 crx- retinaACAGGCACGA
GGGACCTCGT
14.80.0148
P10.5 crx+ retinaACAGGCACGA
CCAATGCTCC
GGGACCTCGT
GTGATAGCAT
11.40.0114
ONLGGGACCTCGT
1.90.0019