Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.240839	D3Ertd34e	DNA segment, Chr 3, ERATO Doi 34, expressed	3	3 49.0 cM	52061
Mm.240839	Tpm3	tropomyosin 3, gamma	3		59069
Gene Ontology	actin binding | cytoskeleton | muscle development | muscle thin filament tropomyosin | regulation of muscle contraction
Human Homolog	TPM3[tropomyosin 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 115 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACATCATCT (2) AGGCCCTGGG CCGCCCCTTA (2) GAGGAGAAAC (2) GTCTTTGTGA TATTTTTCTA (4) TCTATCCAGA TTCAGGTGGT (2) 32.5 0.0325 Cb medulloblastoma AGGCCCTGGG GAGGAGAAAA (2) GAGGAGAAAC (2) GATATTTTCT (3) GTCTTTGTGA TATTTTTCTA (4) TTCAGGTGGT (2) 23 0.023 P8 GC+1d culture AACATCATCT (2) GAGGAGAAAA (2) GAGGAGAAAC (2) GATATTTTCT (3) GCAATTGGGT (2) GCCGGGACCA (2) GTCTTTGTGA TATTTTTCTA (4) TTCAGGTGGT (2) 30.5 0.0305 P8 GC+SHH+1d culture AACATCATCT (2) AGGCCCTGGG GAGGAGAAAA (2) GCCGGGACCA (2) GGCGGGACCA (2) TATTTTTCTA (4) TCTATCCAGA TTCAGGTGGT (2) 42.2 0.0422 3T3 fibroblasts CCGCCCCTTA (2) GAGGAGAAAC (2) GCCGGGACCA (2) GTCTTTGTGA TTCAGGTGGT (2) 31.5 0.0315 E15 cortex AACATCATCT (2) GCAATTGGGT (2) GCCGGGACCA (2) TGGCTAAATC (2) TTCAGGTGGT (2) 44.3 0.0443 P1 cortex AACATCATCT (2) AGGCCCTGGG TATTTTTCTA (4) TCTGAAGAGG (2) TTCAGGTGGT (2) 40.9 0.0409 Hypothalamus AACATCATCT (2) GAGGAGAAAC (2) GATATTTTCT (3) GCCGGGACCA (2) TTCAGGTGGT (2) 14.4 0.0144 E12.5 retina AGGCCCTGGG TATTTTTCTA (4) TCTATCCAGA TTCAGGTGGT (2) 35.7 0.0357 E14.5 retina AACATCATCT (2) AGGCCCTGGG CCGCCCCTTA (2) GCAATTGGGT (2) GCCGGGACCA (2) TATTTTTCTA (4) TTCAGGTGGT (2) 54.6 0.0546 E16.5 retina AACATCATCT (2) AGGCCCTGGG GATATTTTCT (3) GCAATTGGGT (2) TATTTTTCTA (4) TGGCTAAATC (2) TTCAGGTGGT (2) 36.2 0.0362 E18.5 retina AGGCCCTGGG GAGGAGAAAC (2) GCAATTGGGT (2) TATTTTTCTA (4) TGGCTAAATC (2) TTCAGGTGGT (2) 18.2 0.0182 P0.5 retina AACATCATCT (2) AGGCCCTGGG GAGGAGAAAC (2) GCAATTGGGT (2) TATTTTTCTA (4) TTCAGGTGGT (2) 27.7 0.0277 P2.5 retina AGGCCCTGGG GAGGAGAAAA (2) GCAATTGGGT (2) GTTCCAGGTG (2) TATTTTTCTA (4) TCTATCCAGA TTCAGGTGGT (2) 26.4 0.0264 P4.5 retina AACATCATCT (2) AGGCCCTGGG GCAATTGGGT (2) GTTCCAGGTG (2) TATTTTTCTA (4) TCTGAAGAGG (2) TTCAGGTGGT (2) 37.8 0.0378 P6.5 retina AACATCATCT (2) AGGCCCTGGG GATATTTTCT (3) GCAATTGGGT (2) TATTTTTCTA (4) TCTATCCAGA TCTGAAGAGG (2) TTCAGGTGGT (2) 40.1 0.0401 P10.5 crx- retina AACATCATCT (2) CCGCCCCTTA (2) GATATTTTCT (3) TATTTTTCTA (4) TTCAGGTGGT (2) 18.7 0.0187 Adult retinal TATTTTTCTA (4) TTCAGGTGGT (2) 9.3 0.0093 ONL GCAATTGGGT (2) TATTTTTCTA (4) TCTATCCAGA TTCAGGTGGT (2) 7.6 0.0076