Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.241063	AI894139	expressed sequence AI894139	6		101197
Mm.241063	A230106D06Rik	RIKEN cDNA A230106D06 gene	6		232785
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 124 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC GACAAAAAAA (15) 6.5 0.0065 P8 Cb GC GCTTGCTGCC (8) 4.9 0.0049 P8 Cb GC GTGGCACACG (29) 4.9 0.0049 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma GACAAAAAAA (15) 11.6 0.0116 Cb medulloblastoma TGGCCACTGG (9) 4.6 0.0046 Cb medulloblastoma CACACTTGGC (4) 2.3 0.0023 Cb medulloblastoma GTGGCACACG (29) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture GACAAAAAAA (15) 9.1 0.0091 P8 GC+1d culture GCTTGCTGCC (8) 2.3 0.0023 P8 GC+1d culture AGACACTCCT (5) 1.1 0.0011 P8 GC+1d culture CACACTTGGC (4) 1.1 0.0011 P8 GC+1d culture GCTGGCTGCC (4) 1.1 0.0011 P8 GC+1d culture GTGGCACACG (29) 1.1 0.0011 P8 GC+1d culture TGGCCACTGG (9) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture GTGGCACACG (29) 7 0.007 P8 GC+SHH+1d culture GACAAAAAAA (15) 5.9 0.0059 P8 GC+SHH+1d culture AGACACTCCT (5) 2.3 0.0023 P8 GC+SHH+1d culture GCTGGCTGCC (4) 2.3 0.0023 P8 GC+SHH+1d culture CAAGCTTTGT (6) 1.2 0.0012 P8 GC+SHH+1d culture GAGGTGGAAA (11) 1.2 0.0012 P8 GC+SHH+1d culture GCTTGCTGCC (8) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts GTGGCACACG (29) 35 0.035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex GTGGCACACG (29) 69.3 0.0693 E15 cortex CAAGCTTTGT (6) 4.9 0.0049 E15 cortex GCTTGCTGCC (8) 4.9 0.0049 E15 cortex TGGGCACTGG (9) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex GTGGCACACG (29) 9.1 0.0091 P1 cortex GACAAAAAAA (15) 4.5 0.0045 P1 cortex GCTGGCTGCC (4) 4.5 0.0045 P1 cortex GCTTGCTGCC (8) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus GACAAAAAAA (15) 3.6 0.0036 Hypothalamus GAGGTGGAAA (11) 3.6 0.0036 Hypothalamus TGGCCACTGG (9) 1.8 0.0018 Hypothalamus TGGGCACTGG (9) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina GTGGCACACG (29) 13.1 0.0131 E12.5 retina GAGGTGGAAA (11) 3.8 0.0038 E12.5 retina AGACACTCCT (5) 1.9 0.0019 E12.5 retina GACAAAAAAA (15) 1.9 0.0019 E12.5 retina GCTGGCTGCC (4) 1.9 0.0019 E12.5 retina TGGGCACTGG (9) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina GTGGCACACG (29) 18.2 0.0182 E14.5 retina ACTGAGGCGG (3) 1.8 0.0018 E14.5 retina GACAAAAAAA (15) 1.8 0.0018 E14.5 retina GAGGTGGAAA (11) 1.8 0.0018 E14.5 retina TGGGCACTGG (9) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina GCTTGCTGCC (8) 5.4 0.0054 E16.5 retina GTGGCACACG (29) 5.4 0.0054 E16.5 retina ACTGAGGCGG (3) 3.6 0.0036 E16.5 retina GAGGTGGAAA (11) 3.6 0.0036 E16.5 retina GCTGGCTGCC (4) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina GCTGGCTGCC (4) 3.6 0.0036 E18.5 retina GTGGCACACG (29) 3.6 0.0036 E18.5 retina CAAGCTTTGT (6) 1.8 0.0018 E18.5 retina GACAAAAAAA (15) 1.8 0.0018 E18.5 retina GAGGTGGAAA (11) 1.8 0.0018 E18.5 retina TCCCTTTGAG (4) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina GTGGCACACG (29) 5.9 0.0059 P0.5 retina GCTTGCTGCC (8) 3.9 0.0039 P0.5 retina AGACACTCCT (5) 2 0.002 P0.5 retina GAGGTGGAAA (11) 2 0.002 P0.5 retina TGGCCACTGG (9) 2 0.002 P0.5 retina TGGGCCCTGG (8) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina GAGGTGGAAA (11) 8.8 0.0088 P2.5 retina GTGGCACACG (29) 8.8 0.0088 P2.5 retina CAAGCTTTGT (6) 5.3 0.0053 P2.5 retina AGACACTCCT (5) 1.8 0.0018 P2.5 retina TCCCTTTGAG (4) 1.8 0.0018 P2.5 retina TGGCCACTGG (9) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina GTGGCACACG (29) 13.9 0.0139 P4.5 retina GAGGTGGAAA (11) 5.9 0.0059 P4.5 retina GACAAAAAAA (15) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina GTGGCACACG (29) 6.7 0.0067 P6.5 retina CAAGCTTTGT (6) 3.3 0.0033 P6.5 retina CACACTTGGC (4) 1.7 0.0017 P6.5 retina GACAAAAAAA (15) 1.7 0.0017 P6.5 retina GAGGTGGAAA (11) 1.7 0.0017 P6.5 retina GCTTGCTGCC (8) 1.7 0.0017 P6.5 retina TCCCTTTGAG (4) 1.7 0.0017 P6.5 retina TGGCCACTGG (9) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina GCTTGCTGCC (8) 5.6 0.0056 P10.5 crx- retina GAGGTGGAAA (11) 3.7 0.0037 P10.5 crx- retina TGGGCACTGG (9) 3.7 0.0037 P10.5 crx- retina TTCAGTTCCC (5) 3.7 0.0037 P10.5 crx- retina AGACACTCCT (5) 1.9 0.0019 P10.5 crx- retina GTGGCACACG (29) 1.9 0.0019 P10.5 crx- retina TGGCCACTGG (9) 1.9 0.0019 P10.5 crx- retina TGGGCCCTGG (8) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina GTGGCACACG (29) 9.6 0.0096 P10.5 crx+ retina GACAAAAAAA (15) 3.8 0.0038 P10.5 crx+ retina GCTTGCTGCC (8) 3.8 0.0038 P10.5 crx+ retina AGACACTCCT (5) 1.9 0.0019 P10.5 crx+ retina CAAGCTTTGT (6) 1.9 0.0019 P10.5 crx+ retina TGGGCCCTGG (8) 1.9 0.0019 P10.5 crx+ retina TTCAGTTCCC (5) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal GTGGCACACG (29) 13 0.013 Adult retinal AGACACTCCT (5) 1.9 0.0019 Adult retinal CACACTTGGC (4) 1.9 0.0019 Adult retinal GACAAAAAAA (15) 1.9 0.0019 Adult retinal GCTGGCTGCC (4) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL GTGGCACACG (29) 7.7 0.0077 ONL CAAGCTTTGT (6) 5.7 0.0057 ONL GACAAAAAAA (15) 3.8 0.0038 ONL CACACTTGGC (4) 1.9 0.0019 ONL TGGGCCCTGG (8) 1.9 0.0019