Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.241134	4930445K14Rik	RIKEN cDNA 4930445K14 gene	2		74886
Mm.241134	2310022K11Rik	RIKEN cDNA 2310022K11 gene	2		70282
Mm.241134	F730014I05Rik	RIKEN cDNA F730014I05 gene	2		228866
Human Homolog	C20orf67[chromosome 20 open reading frame 67]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 108 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTCTGAGGA CCTAGTGTGG (3) CTCTCCCCTC (5) CTGACCTGTG CTGGGTGCCT (5) GCTCCAGCTC (3) GTGACACCTT TTTTCATTTT (3) 21.2 0.0212 Cb medulloblastoma GTGACACCTT 6.9 0.0069 P8 GC+1d culture CCTAGTGTGG (3) CTGACCTGTG CTGGGTGCCT (5) GCTCCAGCTC (3) GTGACACCTT TTTTCATTTT (3) 15.8 0.0158 P8 GC+SHH+1d culture ATTCTGAGGA CTGACCTGTG CTGGGTGCCT (5) GCGGCAGCGG (2) GCTCCAGCTA GCTCCAGCTC (3) GGTGCTTTCA GTGACACCTT TTTTCATTTT (3) 24.6 0.0246 3T3 fibroblasts ATTCTGAGGA GCTCCAGCTA GGTGCTTTCA 14 0.014 E15 cortex CTGACCTGTG CTGGGTGCCT (5) GCTGGGGCCA 24.7 0.0247 P1 cortex GCTGCGGCCC (3) GTGACACCTT TTTTCATTTT (3) 18.1 0.0181 Hypothalamus CTGGGTGCCT (5) GCTGGGGCCA GGTGCTTTCA GTGACACCTT 9 0.009 E12.5 retina ATTCTGAGGA CTGACCTGTG CTGGGTGCCT (5) GGTGCTTTCA GTGACACCTT GTGGCTTTCA 15.2 0.0152 E14.5 retina AAAAAAAACT AGCGTCTGCA GCTCCAGCTC (3) 5.4 0.0054 E16.5 retina ATTCTGAGGA CCTAGTGTGG (3) CTGACCTGTG CTGGGTGCCT (5) GCGGCAGCGG (2) GCTGCGGCCC (3) GGTGCTTTCA GTGACACCTT 30.7 0.0307 E18.5 retina ATTCTGAGGA CTGACCTGTG CTGGGTGCCT (5) 10.9 0.0109 P0.5 retina ATTCTGAGGA CCCTCCCTCA (3) CTGGGTGCCT (5) GCTCCAGCTC (3) GGTGCTTTCA GTGGCTTTCA TACAAGGAAA 23.6 0.0236 P2.5 retina ATTCTGAGGA CTGACCTGTG CTGGGTGCCT (5) GGTGCTTTCA GTGACACCTT TTTTCATTTT (3) 17.7 0.0177 P4.5 retina AAAAAAAACT CCCTCCCTCA (3) CTGACCTGTG CTGGGTGCCT (5) GTGACACCTT TACAAGGAAA 16 0.016 P6.5 retina AGCGTCTGCA ATTCTGAGGA CTGACCTGTG CTGGGTGCCT (5) GCTCCAGCTC (3) GGTGCTTTCA GTGACACCTT 18.3 0.0183 P10.5 crx- retina CTGGGTGCCT (5) GCTCCAGCTC (3) GCTGCGGCCC (3) GGTGCTTTCA GTGACACCTT TACAAGGAAA 18.7 0.0187 P10.5 crx+ retina AGCGTCTGCA CCCTCCCTCA (3) CTGACCTGTG CTGGGTGCCT (5) GCGGCAGCGG (2) GCTGGGGCCA GTGACACCTT 30.6 0.0306 Adult retinal AGCGTCTGCA CCCTCCCTCA (3) CTGACCTGTG CTGGGTGCCT (5) GCTCCAGCTC (3) GTGACACCTT 59.5 0.0595 ONL AGCGTCTGCA CCCTCCCTCA (3) GCTCCAGCTA GCTCCAGCTC (3) GGTGCTTTCA GTGGCTTTCA 76.5 0.0765