Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.24119
2210415F13Rik
RIKEN cDNA 2210415F13 gene
11
70163
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 60 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
GACTTCCAGG (
5
)
4.9
0.0049
P8 Cb GC
GGGCACCAAG (
4
)
1.6
0.0016
P8 Cb GC
TGGGGGCACA (
3
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
GACTTCCAGG (
5
)
4.6
0.0046
Cb medulloblastoma
GGGCACCAAG (
4
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
CCACCCTAGG (
3
)
1.1
0.0011
P8 GC+1d culture
GACCACAACA (
4
)
1.1
0.0011
P8 GC+1d culture
GACTTCCAGG (
5
)
1.1
0.0011
P8 GC+1d culture
GGGCACCAAG (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
GACTTCCAGG (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
GGGCACCAAG (
4
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
GACTTCCAGG (
5
)
14.8
0.0148
E15 cortex
GACCACAACA (
4
)
4.9
0.0049
E15 cortex
GCTCTGGCAG
(
2
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
CCACCCTAGG (
3
)
1.8
0.0018
Hypothalamus
GACTTCCAGG (
5
)
1.8
0.0018
Hypothalamus
GGCACCATAG (
2
)
1.8
0.0018
Hypothalamus
GGGCACCAAG (
4
)
1.8
0.0018
Hypothalamus
TGGGGGCACA (
3
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
CCACCCTAGG (
3
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
GACTTCCAGG (
5
)
5.5
0.0055
E14.5 retina
GTCTCAAAGT (
5
)
3.6
0.0036
E14.5 retina
TGGGGGCACA (
3
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
GACTTCCAGG (
5
)
10.9
0.0109
E16.5 retina
GTCTCAAAGT (
5
)
7.2
0.0072
E16.5 retina
CCACCCTAGG (
3
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
GACTTCCAGG (
5
)
7.3
0.0073
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
GACTTCCAGG (
5
)
5.9
0.0059
P0.5 retina
GACCACAACA (
4
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
GACTTCCAGG (
5
)
15.8
0.0158
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
GACTTCCAGG (
5
)
13.9
0.0139
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
GACTTCCAGG (
5
)
10
0.01
P6.5 retina
GGGCACCAAG (
4
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
GACTTCCAGG (
5
)
27.9
0.0279
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
GACTTCCAGG (
5
)
7.7
0.0077
P10.5 crx+ retina
CCACCCTAGG (
3
)
3.8
0.0038
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
GACTTCCAGG (
5
)
13
0.013
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
GACTTCCAGG (
5
)
5.7
0.0057
ONL
GCTCTGGCAG
(
2
)
3.8
0.0038
ONL
GGCACCATAG (
2
)
1.9
0.0019
