| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAGCCCCTTG GCCAAAGCCA (3) TTATTATATA
| 6.5 | 0.0065 |
| Cb medulloblastoma | ACCACAAAAA TTATTATATA
| 9.2 | 0.0092 |
| P8 GC+1d culture | GAGCCCCTTG
| 1.1 | 0.0011 |
| P8 GC+SHH+1d culture | GAGCCCCTTG GAGGAAGAAG (2) TTATTATATA TTGCTTTTTG (2)
| 10.6 | 0.0106 |
| 3T3 fibroblasts | GAGCCCCTTG
| 10.5 | 0.0105 |
| E15 cortex | GAGGAAGAAG (2)
| 4.9 | 0.0049 |
| P1 cortex | TTATTATATA TTGCTTTTTG (2)
| 9 | 0.009 |
| Hypothalamus | GAGCCCCTTG TTATTATATA TTGCTTTTTG (2)
| 27.1 | 0.0271 |
| E12.5 retina | GAGCCCCTTG TAAATATGCC TTATTATATA
| 7.6 | 0.0076 |
| E14.5 retina | TTATTATATA
| 9.1 | 0.0091 |
| E16.5 retina | GAGCCCCTTG GAGGAAGAAG (2) TTATTATATA
| 7.2 | 0.0072 |
| E18.5 retina | GAGCCCCTTG TTATTATATA
| 9.1 | 0.0091 |
| P0.5 retina | GAGCCCCTTG TTATTATATA
| 15.7 | 0.0157 |
| P2.5 retina | GAGCCCCTTG TTATTATATA
| 5.3 | 0.0053 |
| P4.5 retina | TAAATATGCC TTATTATATA
| 4 | 0.004 |
| P6.5 retina | GAGCCCCTTG GATACTGACA TTATTATATA TTTTTCTGTA (2)
| 6.8 | 0.0068 |
| P10.5 crx- retina | GAGCCCCTTG TTATTATATA
| 13 | 0.013 |
| P10.5 crx+ retina | GAGCCCCTTG GCCAAAGCCA (3) TAAATATGCC TTATTATATA TTTTTCTGTA (2)
| 34.5 | 0.0345 |
| Adult retinal | ACCACAAAAA GAGCCCCTTG GCCAAAGCCA (3) TTATTATATA TTGCTTTTTG (2)
| 9.5 | 0.0095 |
| ONL | ACCACAAAAA GAGCCCCTTG
| 5.7 | 0.0057 |