Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.241489
5830416A07Rik
RIKEN cDNA 5830416A07 gene
8
76014
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 73 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAATTGGATC (
2
)
3.3
0.0033
P8 Cb GC
AAAGGAAACT
(
3
)
1.6
0.0016
P8 Cb GC
AAAGGCAAAG (
5
)
1.6
0.0016
P8 Cb GC
GCACTGCCCT (
11
)
1.6
0.0016
P8 Cb GC
TTTTTATAAA
(
4
)
1.6
0.0016
Cb medulloblastoma
AAATTGGATC (
2
)
6.9
0.0069
Cb medulloblastoma
TGCGTCCCTC (
3
)
2.3
0.0023
P8 GC+1d culture
TGCGTCCCTC (
3
)
11.4
0.0114
P8 GC+1d culture
AAATTGGATC (
2
)
4.6
0.0046
P8 GC+1d culture
GACAGACGGA
(
3
)
3.4
0.0034
P8 GC+1d culture
ATGAAGATGA (
6
)
2.3
0.0023
P8 GC+1d culture
GGACAGACAC (
4
)
2.3
0.0023
P8 GC+1d culture
GCACTGCCCT (
11
)
1.1
0.0011
P8 GC+SHH+1d culture
TGCGTCCCTC (
3
)
7
0.007
P8 GC+SHH+1d culture
AAATTGGATC (
2
)
5.9
0.0059
P8 GC+SHH+1d culture
AACTGGATCC (
2
)
1.2
0.0012
P8 GC+SHH+1d culture
ATGAAGATGA (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
GACAGACGGA
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GCACTGCCCT (
11
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTTTATAAA
(
4
)
1.2
0.0012
3T3 fibroblasts
GACAGACGGA
(
3
)
14
0.014
3T3 fibroblasts
GCACTGCCCT (
11
)
14
0.014
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
AAAGGCAAAG (
5
)
3.5
0.0035
3T3 fibroblasts
AAATTGGATC (
2
)
3.5
0.0035
E15 cortex
AAATTGGATC (
2
)
4.9
0.0049
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
AAAGGCAAAG (
5
)
4.5
0.0045
P1 cortex
AAATTGGATC (
2
)
4.5
0.0045
P1 cortex
GGACAGACAC (
4
)
4.5
0.0045
P1 cortex
TTTTTATAAA
(
4
)
4.5
0.0045
Hypothalamus
AAATTGGATC (
2
)
5.4
0.0054
Hypothalamus
GGACAGACAC (
4
)
3.6
0.0036
Hypothalamus
TGCGTCCCTC (
3
)
1.8
0.0018
E12.5 retina
AAATTGGATC (
2
)
5.6
0.0056
E12.5 retina
AAAGGCAAAG (
5
)
3.8
0.0038
E12.5 retina
AACTGGATCC (
2
)
1.9
0.0019
E14.5 retina
AAAGGAAACT
(
3
)
1.8
0.0018
E14.5 retina
GACAGACGGA
(
3
)
1.8
0.0018
E14.5 retina
TTTTTATAAA
(
4
)
1.8
0.0018
E16.5 retina
AAATTGGATC (
2
)
5.4
0.0054
E16.5 retina
ATGAAGATGA (
6
)
1.8
0.0018
E16.5 retina
TTTTTATAAA
(
4
)
1.8
0.0018
E18.5 retina
AAATTGGATC (
2
)
1.8
0.0018
E18.5 retina
TTTTTATAAA
(
4
)
1.8
0.0018
P0.5 retina
GACAGACGGA
(
3
)
5.9
0.0059
P0.5 retina
AAATTGGATC (
2
)
3.9
0.0039
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
TTTTTATAAA
(
4
)
3.9
0.0039
P0.5 retina
GGACAGACAC (
4
)
2
0.002
P2.5 retina
AAATTGGATC (
2
)
1.8
0.0018
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P4.5 retina
AAATTGGATC (
2
)
4
0.004
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P6.5 retina
AAATTGGATC (
2
)
10
0.01
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
ATGAAGATGA (
6
)
1.7
0.0017
P6.5 retina
GGACAGACAC (
4
)
1.7
0.0017
P10.5 crx- retina
AAATTGGATC (
2
)
16.7
0.0167
P10.5 crx- retina
AACTGGATCC (
2
)
5.6
0.0056
P10.5 crx- retina
GGACAGACAC (
4
)
1.9
0.0019
P10.5 crx+ retina
AAATTGGATC (
2
)
13.5
0.0135
P10.5 crx+ retina
GGACAGACAC (
4
)
1.9
0.0019
Adult retinal
AAATTGGATC (
2
)
7.4
0.0074
Adult retinal
GACAGACGGA
(
3
)
3.7
0.0037
Adult retinal
GGACAGACAC (
4
)
3.7
0.0037
Adult retinal
AAAGGCAAAG (
5
)
1.9
0.0019
Adult retinal
AACTGGATCC (
2
)
1.9
0.0019
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
ONL
AAATTGGATC (
2
)
9.6
0.0096
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
AAAGGAAACT
(
3
)
1.9
0.0019
ONL
AACTGGATCC (
2
)
1.9
0.0019
