Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.241604	1110060F11Rik	RIKEN cDNA 1110060F11 gene	4		67830
Gene Ontology	Golgi apparatus | integral to Golgi membrane | integral to membrane | retrograde transport, Golgi to ER
Human Homolog	RER1[RER1 homolog (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 72 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTTGTATCT (7) 6.5 0.0065 P8 Cb GC ATTGCTTTTG (3) 3.3 0.0033 P8 Cb GC GCCTTTTACT (2) 3.3 0.0033 Cb medulloblastoma ATTGCTTTTG (3) 6.9 0.0069 Cb medulloblastoma GGGGAAAAAA (28) 4.6 0.0046 Cb medulloblastoma ATTAAATACC 2.3 0.0023 Cb medulloblastoma ATTTGTATCT (7) 2.3 0.0023 P8 GC+1d culture ATTTGTATCT (7) 12.6 0.0126 P8 GC+1d culture GCCTTTTACT (2) 4.6 0.0046 P8 GC+1d culture ATTGCTTTTG (3) 3.4 0.0034 P8 GC+1d culture AACATCACTG 1.1 0.0011 P8 GC+1d culture ATTAAATACC 1.1 0.0011 P8 GC+1d culture GGGGAAAAAA (28) 1.1 0.0011 P8 GC+SHH+1d culture ATTTGTATCT (7) 8.2 0.0082 P8 GC+SHH+1d culture AACATCACTG 3.5 0.0035 P8 GC+SHH+1d culture GCCTTTTACT (2) 3.5 0.0035 P8 GC+SHH+1d culture ATTGCTTTTG (3) 2.3 0.0023 E15 cortex GGGGAAAAAA (28) 4.9 0.0049 E15 cortex TAGACAAAAC (2) 4.9 0.0049 P1 cortex ATTTGTATCT (7) 9.1 0.0091 P1 cortex ATTAAATACC 4.5 0.0045 P1 cortex ATTGCTTTTG (3) 4.5 0.0045 Hypothalamus ATTGCTTTTG (3) 3.6 0.0036 Hypothalamus ATTTGTATCT (7) 1.8 0.0018 Hypothalamus GCCTTTTACT (2) 1.8 0.0018 E12.5 retina ATTGCTTTTG (3) 5.6 0.0056 E12.5 retina ATTTGTATCT (7) 3.8 0.0038 E12.5 retina AACATCACTG 1.9 0.0019 E12.5 retina GCCTTTTACT (2) 1.9 0.0019 E12.5 retina GGGGAAAAAA (28) 1.9 0.0019 E14.5 retina ATTTGTATCT (7) 7.3 0.0073 E14.5 retina GAAAAAGAGA (6) 7.3 0.0073 E14.5 retina ATTGCTTTTG (3) 5.5 0.0055 E14.5 retina GCCTTTTACT (2) 1.8 0.0018 E16.5 retina ATTTGTATCT (7) 12.7 0.0127 E16.5 retina ATTGCTTTTG (3) 5.4 0.0054 E16.5 retina GCCTTTTACT (2) 3.6 0.0036 E16.5 retina ATTAAATACC 1.8 0.0018 E16.5 retina GGGGAAAAAA (28) 1.8 0.0018 E16.5 retina TAGACAAAAC (2) 1.8 0.0018 E18.5 retina ATTTGTATCT (7) 12.7 0.0127 E18.5 retina ATTGCTTTTG (3) 3.6 0.0036 E18.5 retina GCCTTTTACT (2) 3.6 0.0036 E18.5 retina GGGGAAAAAA (28) 3.6 0.0036 P0.5 retina ATTTGTATCT (7) 9.8 0.0098 P0.5 retina ATTGCTTTTG (3) 3.9 0.0039 P2.5 retina ATTTGTATCT (7) 12.3 0.0123 P2.5 retina ATTGCTTTTG (3) 5.3 0.0053 P2.5 retina ATTAAATACC 3.5 0.0035 P2.5 retina GCCTTTTACT (2) 3.5 0.0035 P4.5 retina ATTGCTTTTG (3) 11.9 0.0119 P4.5 retina ATTTGTATCT (7) 9.9 0.0099 P4.5 retina GCCTTTTACT (2) 2 0.002 P6.5 retina ATTGCTTTTG (3) 8.3 0.0083 P6.5 retina ATTAAATACC 1.7 0.0017 P6.5 retina ATTTGTATCT (7) 1.7 0.0017 P6.5 retina GGGGAAAAAA (28) 1.7 0.0017 P10.5 crx- retina ATTTGTATCT (7) 7.4 0.0074 P10.5 crx- retina ATTGCTTTTG (3) 5.6 0.0056 P10.5 crx- retina ATTAAATACC 1.9 0.0019 P10.5 crx+ retina ATTGCTTTTG (3) 13.5 0.0135 P10.5 crx+ retina ATTTGTATCT (7) 9.6 0.0096 P10.5 crx+ retina GCCTTTTACT (2) 3.8 0.0038 P10.5 crx+ retina AACATCACTG 1.9 0.0019 Adult retinal ATTTGTATCT (7) 7.4 0.0074 Adult retinal AACATCACTG 1.9 0.0019 ONL GAAAAAGAGA (6) 3.8 0.0038 ONL GCCTTTTACT (2) 3.8 0.0038 ONL AACATCACTG 1.9 0.0019 ONL ATTAAATACC 1.9 0.0019 ONL ATTTGTATCT (7) 1.9 0.0019 ONL TAGACAAAAC (2) 1.9 0.0019