Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.241700	A230085B16Rik	RIKEN cDNA A230085B16 gene			442823
Mm.241700	Gpm6a	glycoprotein m6a	8		234267
Gene Ontology	integral to membrane
Human Homolog	GPM6A[glycoprotein M6A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGTGCTTTG (2) 84.8 0.0848 P8 Cb GC GAAATAACTA (2) 6.5 0.0065 P8 Cb GC CAGAAGTACG (3) 3.3 0.0033 P8 Cb GC GTTAATGTTT (2) 3.3 0.0033 P8 Cb GC AAAATACAAA (2) 1.6 0.0016 P8 Cb GC ACTAGTAGTT (2) 1.6 0.0016 P8 Cb GC ATGACTCCGC (2) 1.6 0.0016 Cb medulloblastoma GAGTGCTTTG (2) 113.3 0.1133 Cb medulloblastoma ACTAGTAGTT (2) 4.6 0.0046 Cb medulloblastoma AAAATACAAA (2) 2.3 0.0023 Cb medulloblastoma ATGACTCCGC (2) 2.3 0.0023 P8 GC+1d culture GAGTGCTTTG (2) 91.3 0.0913 P8 GC+1d culture GAAATAACTA (2) 12.6 0.0126 P8 GC+1d culture ACTAGTAGTT (2) 9.1 0.0091 P8 GC+1d culture AAAATACAAA (2) 6.8 0.0068 P8 GC+1d culture ATTATGCATT (2) 3.4 0.0034 P8 GC+1d culture CAGAAGTACG (3) 3.4 0.0034 P8 GC+1d culture AAAATACATA (2) 2.3 0.0023 P8 GC+1d culture AGTAATCAGA (2) 2.3 0.0023 P8 GC+1d culture ATGACTCCGC (2) 1.1 0.0011 P8 GC+SHH+1d culture GAGTGCTTTG (2) 77.3 0.0773 P8 GC+SHH+1d culture GAAATAACTA (2) 7 0.007 P8 GC+SHH+1d culture AAAATACAAA (2) 3.5 0.0035 P8 GC+SHH+1d culture ACTAGTAGTT (2) 3.5 0.0035 P8 GC+SHH+1d culture AGTAATCAGA (2) 3.5 0.0035 P8 GC+SHH+1d culture ATTATGCATT (2) 3.5 0.0035 P8 GC+SHH+1d culture CAGAAGTACG (3) 2.3 0.0023 E15 cortex GAGTGCTTTG (2) 34.6 0.0346 P1 cortex GAGTGCTTTG (2) 27.3 0.0273 P1 cortex ACTAGTAGTT (2) 4.5 0.0045 P1 cortex ATTATGCATT (2) 4.5 0.0045 P1 cortex GAAATAACTA (2) 4.5 0.0045 P1 cortex GAGTGTTTTG (2) 4.5 0.0045 Hypothalamus GAGTGCTTTG (2) 48.9 0.0489 Hypothalamus GAAATAACTA (2) 7.2 0.0072 Hypothalamus AAAATACAAA (2) 3.6 0.0036 Hypothalamus ACTAGTAGTT (2) 1.8 0.0018 Hypothalamus CAGAAGTACG (3) 1.8 0.0018 E12.5 retina GAGTGCTTTG (2) 7.5 0.0075 E12.5 retina AGTAATCAGA (2) 3.8 0.0038 E12.5 retina CAGAAGTACG (3) 1.9 0.0019 E12.5 retina GAAATAACTA (2) 1.9 0.0019 E14.5 retina GAGTGCTTTG (2) 3.6 0.0036 E14.5 retina GAAATAACTA (2) 1.8 0.0018 E14.5 retina GTTAATGTTT (2) 1.8 0.0018 E16.5 retina GAGTGCTTTG (2) 16.3 0.0163 E16.5 retina AAAATACATA (2) 1.8 0.0018 E16.5 retina GAAATAACTA (2) 1.8 0.0018 E18.5 retina GAGTGCTTTG (2) 30.9 0.0309 E18.5 retina AGTAATCAGA (2) 1.8 0.0018 P0.5 retina GAGTGCTTTG (2) 23.6 0.0236 P0.5 retina AGTAATCAGA (2) 2 0.002 P0.5 retina GAGTGTTTTG (2) 2 0.002 P2.5 retina GAGTGCTTTG (2) 15.8 0.0158 P2.5 retina AAAATACATA (2) 5.3 0.0053 P2.5 retina ACTAGTAGTT (2) 1.8 0.0018 P4.5 retina GAGTGCTTTG (2) 21.8 0.0218 P4.5 retina AAAATACAAA (2) 2 0.002 P4.5 retina AAAATACATA (2) 2 0.002 P6.5 retina GAGTGCTTTG (2) 15 0.015 P6.5 retina AAAATACATA (2) 1.7 0.0017 P6.5 retina AGTAATCAGA (2) 1.7 0.0017 P6.5 retina GAAATAACTA (2) 1.7 0.0017 P10.5 crx- retina GAGTGCTTTG (2) 26 0.026 P10.5 crx- retina GAAATAACTA (2) 5.6 0.0056 P10.5 crx- retina ATTATGCATT (2) 1.9 0.0019 P10.5 crx- retina GAGTGTTTTG (2) 1.9 0.0019 P10.5 crx+ retina GAGTGCTTTG (2) 36.5 0.0365 P10.5 crx+ retina AGTAATCAGA (2) 3.8 0.0038 P10.5 crx+ retina AAAATACAAA (2) 1.9 0.0019 P10.5 crx+ retina GAAATAACTA (2) 1.9 0.0019 Adult retinal GAGTGCTTTG (2) 25.9 0.0259 Adult retinal ACTAGTAGTT (2) 3.7 0.0037 Adult retinal AGTAATCAGA (2) 1.9 0.0019 Adult retinal GAAATAACTA (2) 1.9 0.0019