Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.241714	D16mgi24	DNA Segment, Chr 16, Mouse Genome Informatics 24	16		106256
Mm.241714	Mcm7	minichromosome maintenance deficient 7 (S. cerevisiae)	5		17220
Gene Ontology	ATP binding | cell cycle | cell proliferation | DNA binding | DNA dependent ATPase activity | DNA replication | DNA replication initiation | nucleotide binding | nucleus | regulation of transcription, DNA-dependent
Human Homolog	MCM7[MCM7 minichromosome maintenance deficient 7 (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 94 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGCACTTTT (3) 29.4 0.0294 P8 Cb GC GGAAAAAAAA (69) 8.2 0.0082 P8 Cb GC GGACTTGAAG (9) 4.9 0.0049 P8 Cb GC ACCCCTTGTG (4) 1.6 0.0016 P8 Cb GC CCCGGCTCCC (3) 1.6 0.0016 P8 Cb GC CTGCATTTTT (3) 1.6 0.0016 Cb medulloblastoma GGAAAAAAAA (69) 41.6 0.0416 Cb medulloblastoma CTGCACTTTT (3) 4.6 0.0046 Cb medulloblastoma ACCCCTTGTG (4) 2.3 0.0023 Cb medulloblastoma CTGCATTTTT (3) 2.3 0.0023 Cb medulloblastoma GCCCTTCTGG (11) 2.3 0.0023 Cb medulloblastoma GGACTTGAAG (9) 2.3 0.0023 P8 GC+1d culture CTGCACTTTT (3) 20.5 0.0205 P8 GC+1d culture ACCCCTTGTG (4) 5.7 0.0057 P8 GC+1d culture GGAAAAAAAA (69) 5.7 0.0057 P8 GC+1d culture GCCCTTCTGG (11) 3.4 0.0034 P8 GC+1d culture GTGTGAATGA (7) 3.4 0.0034 P8 GC+1d culture CTGCATTTTT (3) 2.3 0.0023 P8 GC+1d culture CCCGGCTCCC (3) 1.1 0.0011 P8 GC+1d culture CCCTCTGGTG (2) 1.1 0.0011 P8 GC+SHH+1d culture CTGCACTTTT (3) 36.3 0.0363 P8 GC+SHH+1d culture GGAAAAAAAA (69) 7 0.007 P8 GC+SHH+1d culture ACCCCTTGTG (4) 3.5 0.0035 P8 GC+SHH+1d culture CCCGGCTCCC (3) 3.5 0.0035 P8 GC+SHH+1d culture GTGTGAATGA (7) 1.2 0.0012 3T3 fibroblasts CCCGGCTCCC (3) 35 0.035 3T3 fibroblasts ACCCCTTGTG (4) 14 0.014 3T3 fibroblasts AGTGCAGAGG (7) 3.5 0.0035 3T3 fibroblasts CTGCACTTTT (3) 3.5 0.0035 E15 cortex GGAAAAAAAA (69) 9.9 0.0099 E15 cortex GGACTTGAAG (9) 9.9 0.0099 E15 cortex ACCCCTTGTG (4) 4.9 0.0049 E15 cortex CCCGGCTCCC (3) 4.9 0.0049 E15 cortex CTGCACTTTT (3) 4.9 0.0049 P1 cortex ACCCCTTGTG (4) 9.1 0.0091 P1 cortex GGACTTGAAG (9) 9.1 0.0091 P1 cortex GGAAAAAAAA (69) 4.5 0.0045 P1 cortex GTGTGAATGA (7) 4.5 0.0045 Hypothalamus GGAAAAAAAA (69) 14.5 0.0145 Hypothalamus CCCTCTGGTG (2) 1.8 0.0018 Hypothalamus GGACTTGAAG (9) 1.8 0.0018 Hypothalamus GTGTGAATGA (7) 1.8 0.0018 E12.5 retina CTGCACTTTT (3) 28.2 0.0282 E12.5 retina CCCGGCTCCC (3) 5.6 0.0056 E12.5 retina ACCCCTTGTG (4) 1.9 0.0019 E12.5 retina CCCTCTGGTG (2) 1.9 0.0019 E12.5 retina GGAAAAAAAA (69) 1.9 0.0019 E14.5 retina CTGCACTTTT (3) 31 0.031 E14.5 retina GGAAAAAAAA (69) 10.9 0.0109 E14.5 retina CCCTCTGGTG (2) 1.8 0.0018 E16.5 retina CTGCACTTTT (3) 58 0.058 E16.5 retina CCCGGCTCCC (3) 12.7 0.0127 E16.5 retina GGAAAAAAAA (69) 1.8 0.0018 E18.5 retina CTGCACTTTT (3) 32.7 0.0327 E18.5 retina GGAAAAAAAA (69) 16.4 0.0164 E18.5 retina CCCGGCTCCC (3) 3.6 0.0036 P0.5 retina CTGCACTTTT (3) 25.5 0.0255 P0.5 retina GGAAAAAAAA (69) 13.7 0.0137 P0.5 retina ACCCCTTGTG (4) 5.9 0.0059 P0.5 retina CCCGGCTCCC (3) 5.9 0.0059 P0.5 retina CTGCACTTCT (5) 2 0.002 P2.5 retina CTGCACTTTT (3) 22.9 0.0229 P2.5 retina GGAAAAAAAA (69) 7 0.007 P2.5 retina CCCGGCTCCC (3) 1.8 0.0018 P2.5 retina CTGCATTTTT (3) 1.8 0.0018 P4.5 retina CTGCACTTTT (3) 25.8 0.0258 P4.5 retina GGAAAAAAAA (69) 13.9 0.0139 P4.5 retina GTGTGAATGA (7) 4 0.004 P4.5 retina CCCGGCTCCC (3) 2 0.002 P6.5 retina GGAAAAAAAA (69) 13.3 0.0133 P6.5 retina GCCCTTCTGG (11) 5 0.005 P6.5 retina AGTGCAGAGG (7) 3.3 0.0033 P6.5 retina ACCCCTTGTG (4) 1.7 0.0017 P6.5 retina CCCGGCTCCC (3) 1.7 0.0017 P6.5 retina CTGCACTTCT (5) 1.7 0.0017 P6.5 retina CTGCACTTTT (3) 1.7 0.0017 P10.5 crx- retina CCCGGCTCCC (3) 24.2 0.0242 P10.5 crx- retina GCCCTTCTGG (11) 5.6 0.0056 P10.5 crx- retina GGAAAAAAAA (69) 3.7 0.0037 P10.5 crx- retina ACCCCTTGTG (4) 1.9 0.0019 P10.5 crx- retina CTGCACTTTT (3) 1.9 0.0019 P10.5 crx+ retina GGAAAAAAAA (69) 15.4 0.0154 P10.5 crx+ retina CCCGGCTCCC (3) 5.8 0.0058 P10.5 crx+ retina GCCCTTCTGG (11) 1.9 0.0019 P10.5 crx+ retina GGACTTGAAG (9) 1.9 0.0019 Adult retinal CCCGGCTCCC (3) 7.4 0.0074 Adult retinal GCCCTTCTGG (11) 7.4 0.0074 Adult retinal GGAAAAAAAA (69) 5.6 0.0056 Adult retinal ACCCCTTGTG (4) 3.7 0.0037 ONL GGAAAAAAAA (69) 17.2 0.0172 ONL CCCGGCTCCC (3) 5.7 0.0057 ONL CTGCACTTCT (5) 1.9 0.0019 ONL CTGCACTTTT (3) 1.9 0.0019 ONL GCCCTTCTGG (11) 1.9 0.0019