Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.241931	Ppp1cb	protein phosphatase 1, catalytic subunit, beta isoform	5		19046
Gene Ontology	CTD phosphatase activity | cytokinesis | glycogen metabolism | hydrolase activity | manganese ion binding | myosin phosphatase activity | phosphoprotein phosphatase activity | protein amino acid dephosphorylation | protein binding | protein phosphatase type 1 activity | protein phosphatase type 1 activity | protein phosphatase type 2A activity | protein phosphatase type 2C activity | protein serine/threonine phosphatase activity | protein serine/threonine phosphatase complex
Human Homolog	PPP1CB[protein phosphatase 1, catalytic subunit, beta isoform]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 101 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAAAAGGTG CTTAACTTTC CTTTGTAGTG GAAAGGAAAA GGGTTAAAGG TGTGTGCCTG TTTGTAAGTT 29.3 0.0293 Cb medulloblastoma CTTTGTAGTG GAATTAGAAA GTAAAAAAAT (3) GTGGGTACAT TCACAGAGTC (2) 16.1 0.0161 P8 GC+1d culture CTTTGTAGTG TGCATCTTTT (5) TTTGTAAGTT 10.2 0.0102 P8 GC+SHH+1d culture AAGATCCATC CCAAAAGGTG CTTTGTAGTG GTGGGTACAT TTTGTAAGTT 11.8 0.0118 3T3 fibroblasts GTGGGTACAT TGTGTGCCTG 7 0.007 E15 cortex TGCATCTTTT (5) 4.9 0.0049 P1 cortex AGAATCCTTT CCAAAAGGTG CTTTGTTAGT TTTGTAAGTT 22.6 0.0226 Hypothalamus CTTTGTAGTG GGGTTAAAGG GTGGGTACAT TCACAGAGTC (2) 9 0.009 E12.5 retina AAGATCCATC CTTTGTAGTG CTTTGTTAGT 7.6 0.0076 E14.5 retina AGAATCCTTT CTTTGTTAGT GAAAGGAAAA TGCATCTTTT (5) TTTGTAAGTT 12.6 0.0126 E16.5 retina CTTTGTTAGT GAATTAGAAA GTGGGTACAT TCACAGAGTC (2) TTTGTAAGTT 10.8 0.0108 E18.5 retina CTTTGTAGTG CTTTGTTAGT GAAAGGAAAA GAGAGAATGC (2) GTGGTGGAGA TCACAGAGTC (2) 12.6 0.0126 P0.5 retina AAAAGGGGAT (2) AAGATCCATC CCAAAAGGTG CTTTGTAGTG CTTTGTTAGT GAATTAGAAA TCTTCCTCTC (2) TGTGTGCCTG 17.9 0.0179 P2.5 retina AAGATCCATC CTTTGTAGTG CTTTGTTAGT GTAAAAAAAT (3) TCACAGAGTC (2) TTTGTAAGTT 19.5 0.0195 P4.5 retina CTTTGTTAGT GAGAGAATGC (2) TCACAGAGTC (2) TCTTCCTCTC (2) TTTGTAAGTT 13.9 0.0139 P6.5 retina CTTTGTTAGT TCACAGAGTC (2) TCTTCCTCTC (2) TGTGTGCCTG TTTGTAAGTT 14.9 0.0149 P10.5 crx- retina AGAATCCTTT CTTAACTTTC CTTTGTAGTG CTTTGTTAGT TCTTCCTCTC (2) TGTGTGCCTG TTTGTAAGTT 24.3 0.0243 P10.5 crx+ retina AAAAGGGGAT (2) CTTTGTAGTG CTTTGTTAGT GTAAAAAAAT (3) TGTGTGCCTG TTTGTAAGTT 28.7 0.0287 Adult retinal CTTTGTAGTG CTTTGTTAGT GAAAGGAAAA TCACAGAGTC (2) TCTTCCTCTC (2) TGTGTGCCTG 16.9 0.0169 ONL AAAAGGGGAT (2) CTTAACTTTC CTTTGTAGTG CTTTGTTAGT GAGAGAATGC (2) GTGGTGGAGA TCTTCCTCTC (2) TTTGTAAGTT 34.5 0.0345