Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.24231	1110004F10Rik	RIKEN cDNA 1110004F10 gene	7		56372
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	SMAP[small acidic protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAATAAA (17) 11.4 0.0114 P8 Cb GC ATGCTGAGAG (3) 9.8 0.0098 P8 Cb GC CTTGTTTAGT (3) 6.5 0.0065 P8 Cb GC ACGGACAGGT 1.6 0.0016 P8 Cb GC ACTATAACCA 1.6 0.0016 P8 Cb GC ATGGAGAAAG (4) 1.6 0.0016 P8 Cb GC GACAGCACAC (3) 1.6 0.0016 Cb medulloblastoma AAAAAATAAA (17) 6.9 0.0069 Cb medulloblastoma ATGCTGAGAG (3) 4.6 0.0046 Cb medulloblastoma CTTGTTTAGT (3) 2.3 0.0023 Cb medulloblastoma GACCAGCAAC (4) 2.3 0.0023 P8 GC+1d culture AAAAAATAAA (17) 8 0.008 P8 GC+1d culture CTTGTTTAGT (3) 6.8 0.0068 P8 GC+1d culture ATGCTGAGAG (3) 3.4 0.0034 P8 GC+1d culture ACTATAACCA 2.3 0.0023 P8 GC+1d culture GACAGCACAC (3) 2.3 0.0023 P8 GC+SHH+1d culture CTTGTTTAGT (3) 8.2 0.0082 P8 GC+SHH+1d culture ACTATAACCA 4.7 0.0047 P8 GC+SHH+1d culture ATGCTGAGAG (3) 3.5 0.0035 P8 GC+SHH+1d culture AAAAAATAAA (17) 2.3 0.0023 P8 GC+SHH+1d culture GACAGCACAC (3) 2.3 0.0023 P8 GC+SHH+1d culture GCTGCTGAGC (3) 1.2 0.0012 3T3 fibroblasts CTGCTGAGCA (5) 7 0.007 3T3 fibroblasts GACAGCACAC (3) 3.5 0.0035 3T3 fibroblasts GACCAGCAAC (4) 3.5 0.0035 E15 cortex ATGCTGAGAG (3) 4.9 0.0049 P1 cortex ACTATAACCA 9.1 0.0091 Hypothalamus AAAAAATAAA (17) 9.1 0.0091 Hypothalamus ACTATAACCA 1.8 0.0018 Hypothalamus ATGCTGAGAG (3) 1.8 0.0018 E12.5 retina AAAAAATAAA (17) 9.4 0.0094 E12.5 retina ATGCTGAGAG (3) 9.4 0.0094 E12.5 retina ACGGACAGGT 1.9 0.0019 E14.5 retina AAAAAATAAA (17) 5.5 0.0055 E14.5 retina ATGCTGAGAG (3) 5.5 0.0055 E14.5 retina ACTATAACCA 1.8 0.0018 E16.5 retina AAAAAATAAA (17) 9.1 0.0091 E16.5 retina ATGCTGAGAG (3) 9.1 0.0091 E16.5 retina CTTGTTTAGT (3) 3.6 0.0036 E16.5 retina ACGGACAGGT 1.8 0.0018 E16.5 retina ACTATAACCA 1.8 0.0018 E16.5 retina GACAGCACAC (3) 1.8 0.0018 E18.5 retina AAAAAATAAA (17) 16.4 0.0164 E18.5 retina ATGCTGAGAG (3) 7.3 0.0073 P0.5 retina ATGCTGAGAG (3) 3.9 0.0039 P0.5 retina CTGCTGAGCA (5) 3.9 0.0039 P0.5 retina AAAAAATAAA (17) 2 0.002 P0.5 retina ACTATAACCA 2 0.002 P0.5 retina CTTGTTTAGT (3) 2 0.002 P0.5 retina GACAGCACAC (3) 2 0.002 P0.5 retina GCTGCTGAGC (3) 2 0.002 P2.5 retina AAAAAATAAA (17) 12.3 0.0123 P2.5 retina ATGCTGAGAG (3) 12.3 0.0123 P2.5 retina ACTATAACCA 3.5 0.0035 P2.5 retina ACGGACAGGT 1.8 0.0018 P2.5 retina CTTGTTTAGT (3) 1.8 0.0018 P2.5 retina GACAGCACAC (3) 1.8 0.0018 P4.5 retina AAAAAATAAA (17) 11.9 0.0119 P4.5 retina ATGCTGAGAG (3) 7.9 0.0079 P4.5 retina GCTGCTGAGC (3) 2 0.002 P6.5 retina AAAAAATAAA (17) 10 0.01 P6.5 retina ATGCTGAGAG (3) 5 0.005 P6.5 retina ATGGAGAAAG (4) 5 0.005 P6.5 retina CTTGTTTAGT (3) 5 0.005 P6.5 retina ACTATAACCA 1.7 0.0017 P10.5 crx- retina GACCAGCAAC (4) 31.6 0.0316 P10.5 crx- retina ATGCTGAGAG (3) 14.9 0.0149 P10.5 crx- retina AAAAAATAAA (17) 5.6 0.0056 P10.5 crx- retina ACTATAACCA 1.9 0.0019 P10.5 crx+ retina GACCAGCAAC (4) 9.6 0.0096 P10.5 crx+ retina ATGCTGAGAG (3) 3.8 0.0038 P10.5 crx+ retina AAAAAATAAA (17) 1.9 0.0019 P10.5 crx+ retina ACTATAACCA 1.9 0.0019 P10.5 crx+ retina CTGCTGAGCA (5) 1.9 0.0019 Adult retinal ATGCTGAGAG (3) 1.9 0.0019 Adult retinal CTTGTTTAGT (3) 1.9 0.0019 ONL AAAAAATAAA (17) 23 0.023 ONL CTTGTTTAGT (3) 3.8 0.0038 ONL ACTATAACCA 1.9 0.0019 ONL ATGCTGAGAG (3) 1.9 0.0019