Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.24248	Msl31	male-specific lethal-3 homolog 1 (Drosophila)	X		17692
Gene Ontology	chromatin | chromatin assembly/disassembly | chromatin binding | chromatin modification | nucleus | regulation of transcription, DNA-dependent
Human Homolog	MSL3L1[male-specific lethal 3-like 1 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAGCTGTGG (4) 8.2 0.0082 P8 Cb GC GCTGTTTTGT (6) 4.9 0.0049 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 Cb medulloblastoma AGAGCTGTGG (4) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture AGAGCTGTGG (4) 11.4 0.0114 P8 GC+1d culture GCTGTTTTGT (6) 5.7 0.0057 P8 GC+1d culture AACGTATACT (2) 1.1 0.0011 P8 GC+SHH+1d culture AGAGCTGTGG (4) 5.9 0.0059 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture GCTGTTTTGT (6) 4.7 0.0047 3T3 fibroblasts GCTGTTTTGT (6) 17.5 0.0175 3T3 fibroblasts AGAGCTGTGG (4) 7 0.007 3T3 fibroblasts TGCTACACGA 3.5 0.0035 E15 cortex AGAGCTGTGG (4) 9.9 0.0099 E15 cortex GCTGTTTTGT (6) 9.9 0.0099 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex AGAGCTGTGG (4) 4.5 0.0045 P1 cortex GCTGTTTTGT (6) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus AGAGCTGTGG (4) 3.6 0.0036 Hypothalamus GCTGTTTTGT (6) 1.8 0.0018 Hypothalamus TGCTACACGA 1.8 0.0018 E12.5 retina GCTGTTTTGT (6) 7.5 0.0075 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina AACGTATACT (2) 1.9 0.0019 E12.5 retina AGAGCTGTGG (4) 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina AGAGCTGTGG (4) 3.6 0.0036 E14.5 retina GCTGTTTTGT (6) 3.6 0.0036 E16.5 retina GCTGTTTTGT (6) 12.7 0.0127 E16.5 retina AGAGCTGTGG (4) 5.4 0.0054 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina AGAGCTGTGG (4) 3.6 0.0036 E18.5 retina GCTGTTTTGT (6) 3.6 0.0036 P0.5 retina AGAGCTGTGG (4) 11.8 0.0118 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina GCTGTTTTGT (6) 3.9 0.0039 P0.5 retina AACGTATACT (2) 2 0.002 P2.5 retina AGAGCTGTGG (4) 7 0.007 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina GCTGTTTTGT (6) 5.3 0.0053 P4.5 retina GCTGTTTTGT (6) 11.9 0.0119 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina AGAGCTGTGG (4) 4 0.004 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina AGAGCTGTGG (4) 5 0.005 P6.5 retina GCTGTTTTGT (6) 1.7 0.0017 P10.5 crx- retina AGAGCTGTGG (4) 16.7 0.0167 P10.5 crx- retina GCTGTTTTGT (6) 1.9 0.0019 P10.5 crx+ retina AGAGCTGTGG (4) 9.6 0.0096 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina AACGTATACT (2) 1.9 0.0019 P10.5 crx+ retina TGCTACACGA 1.9 0.0019 Adult retinal AGAGCTGTGG (4) 18.5 0.0185 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 ONL GCTGTTTTGT (6) 5.7 0.0057 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL AGAGCTGTGG (4) 1.9 0.0019