Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.24254
Pdcd6
programmed cell death 6
13
18570
Gene Ontology
apoptosis
|
calcium ion binding
Human Homolog
PDCD6[programmed cell death 6]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 66 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCTCTCCAGC (
7
)
57.1
0.0571
P8 Cb GC
TGCCTTACTT
9.8
0.0098
P8 Cb GC
GGAGCTGGCT (
6
)
4.9
0.0049
P8 Cb GC
GGCCTTACTT (
9
)
1.6
0.0016
Cb medulloblastoma
GCTCTCCAGC (
7
)
161.9
0.1619
Cb medulloblastoma
TGCCTTACTT
16.2
0.0162
Cb medulloblastoma
GTCTTCAGCA (
3
)
6.9
0.0069
P8 GC+1d culture
GCTCTCCAGC (
7
)
69.6
0.0696
P8 GC+1d culture
TGCCTTACTT
11.4
0.0114
P8 GC+1d culture
TGCCTTCCTT (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GCTCTCCAGC (
7
)
74.9
0.0749
P8 GC+SHH+1d culture
TGCCTTACTT
12.9
0.0129
3T3 fibroblasts
GCTCTCCAGC (
7
)
28
0.028
E15 cortex
GCTCTCCAGC (
7
)
69.3
0.0693
E15 cortex
TGCCTTACTT
4.9
0.0049
P1 cortex
GCTCTCCAGC (
7
)
54.5
0.0545
P1 cortex
TGCCTTACTT
9.1
0.0091
P1 cortex
GGAGCTGGCT (
6
)
4.5
0.0045
P1 cortex
TGCCTTCCTT (
3
)
4.5
0.0045
Hypothalamus
GCTCTCCAGC (
7
)
77.9
0.0779
Hypothalamus
TGCCTTACTT
9.1
0.0091
Hypothalamus
GGAGCTGGCT (
6
)
5.4
0.0054
E12.5 retina
GCTCTCCAGC (
7
)
50.7
0.0507
E12.5 retina
TGCCTTACTT
3.8
0.0038
E12.5 retina
TGCCTTCCTT (
3
)
1.9
0.0019
E14.5 retina
GCTCTCCAGC (
7
)
72.9
0.0729
E14.5 retina
TGCCTTACTT
21.9
0.0219
E14.5 retina
GGAGCTGGCT (
6
)
3.6
0.0036
E16.5 retina
GCTCTCCAGC (
7
)
97.8
0.0978
E16.5 retina
TGCCTTACTT
10.9
0.0109
E16.5 retina
GGAGCTGGCT (
6
)
3.6
0.0036
E18.5 retina
GCTCTCCAGC (
7
)
125.5
0.1255
E18.5 retina
TGCCTTACTT
14.6
0.0146
E18.5 retina
TGCCTTCCTT (
3
)
1.8
0.0018
P0.5 retina
GCTCTCCAGC (
7
)
66.7
0.0667
P0.5 retina
TGCCTTACTT
3.9
0.0039
P0.5 retina
GGAGCTGGCT (
6
)
2
0.002
P2.5 retina
GCTCTCCAGC (
7
)
75.7
0.0757
P2.5 retina
TGCCTTACTT
10.6
0.0106
P2.5 retina
GGAGCTGGCT (
6
)
3.5
0.0035
P2.5 retina
TGCCTTCCTT (
3
)
1.8
0.0018
P2.5 retina
TTCTTTTTCT (
4
)
1.8
0.0018
P4.5 retina
GCTCTCCAGC (
7
)
65.4
0.0654
P4.5 retina
TGCCTTACTT
17.8
0.0178
P6.5 retina
GCTCTCCAGC (
7
)
81.7
0.0817
P6.5 retina
TGCCTTACTT
11.7
0.0117
P6.5 retina
GGAGCTGGCT (
6
)
1.7
0.0017
P6.5 retina
GGCCTTACTT (
9
)
1.7
0.0017
P10.5 crx- retina
GCTCTCCAGC (
7
)
55.7
0.0557
P10.5 crx- retina
TGCCTTACTT
13
0.013
P10.5 crx- retina
TGAAAAATGG (
2
)
1.9
0.0019
P10.5 crx+ retina
GCTCTCCAGC (
7
)
94.2
0.0942
P10.5 crx+ retina
TGCCTTACTT
15.4
0.0154
P10.5 crx+ retina
GGCCTTACTT (
9
)
5.8
0.0058
P10.5 crx+ retina
GACTCCATTT
(
3
)
1.9
0.0019
P10.5 crx+ retina
GGAGCTGGCT (
6
)
1.9
0.0019
Adult retinal
GCTCTCCAGC (
7
)
57.4
0.0574
Adult retinal
TGCCTTACTT
9.3
0.0093
Adult retinal
GGCCTTACTT (
9
)
7.4
0.0074
Adult retinal
GGAGCTGGCT (
6
)
1.9
0.0019
Adult retinal
TGCCTTCCTT (
3
)
1.9
0.0019
ONL
GCTCTCCAGC (
7
)
28.7
0.0287
ONL
TGCCTTACTT
5.7
0.0057
ONL
GGCCTTACTT (
9
)
3.8
0.0038
ONL
TGAAAAATGG (
2
)
3.8
0.0038
ONL
TTCTTTTTCT (
4
)
1.9
0.0019
