Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.24282	Cyld	cylindromatosis (turban tumor syndrome)	8		74256
Gene Ontology	cysteine-type endopeptidase activity | cysteine-type peptidase activity | hydrolase activity | ubiquitin thiolesterase activity | ubiquitin-dependent protein catabolism
Human Homolog	CYLD[cylindromatosis (turban tumor syndrome)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 105 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC TCACAATGAG (2) 9.8 0.0098 P8 Cb GC TTGTTGCTGG (5) 8.2 0.0082 P8 Cb GC ACAACAAAAT (2) 6.5 0.0065 P8 Cb GC AGACAGAAAA 1.6 0.0016 P8 Cb GC CTGTACAGGG (3) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma ACAACAAAAT (2) 76.3 0.0763 Cb medulloblastoma CTGTACAGGG (3) 4.6 0.0046 Cb medulloblastoma TACTCTTTCT (2) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture ACAACAAAAT (2) 20.5 0.0205 P8 GC+1d culture CTGTACAGGG (3) 4.6 0.0046 P8 GC+1d culture AGACAGAAAA 2.3 0.0023 P8 GC+1d culture TTGTTGCTGG (5) 2.3 0.0023 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture ACAACAAAAT (2) 12.9 0.0129 P8 GC+SHH+1d culture CTGTACAGGG (3) 8.2 0.0082 P8 GC+SHH+1d culture TTGTTGCTGG (5) 2.3 0.0023 P8 GC+SHH+1d culture AGACAGAAAA 1.2 0.0012 P8 GC+SHH+1d culture TTACTGCAAT 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts CTGTACAGGG (3) 7 0.007 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex ACAACAAAAT (2) 4.9 0.0049 E15 cortex CTGTACAGGG (3) 4.9 0.0049 E15 cortex GCTTCCTGTG (8) 4.9 0.0049 E15 cortex TTGTTGCTGG (5) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex AGACAGAAAA 4.5 0.0045 P1 cortex TTGTTGCTGG (5) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus ACAACAAAAT (2) 7.2 0.0072 Hypothalamus TACTCTTTCT (2) 3.6 0.0036 Hypothalamus TTGTTGCTGG (5) 3.6 0.0036 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina TCACAATGAG (2) 7.5 0.0075 E12.5 retina CTGTACAGGG (3) 5.6 0.0056 E12.5 retina ACAACAAAAT (2) 1.9 0.0019 E12.5 retina TTGTTGCTGG (5) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina TCACAATGAG (2) 27.3 0.0273 E14.5 retina TTGTTGCTGG (5) 14.6 0.0146 E14.5 retina ACAACAAAAT (2) 1.8 0.0018 E14.5 retina AGACAGAAAA 1.8 0.0018 E14.5 retina GCTCATAGTC (4) 1.8 0.0018 E14.5 retina GCTTCCTGTG (8) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina ACAACAAAAT (2) 9.1 0.0091 E16.5 retina TTGTTGCTGG (5) 3.6 0.0036 E16.5 retina AGACAGAAAA 1.8 0.0018 E16.5 retina CTGTACAGGG (3) 1.8 0.0018 E16.5 retina GCTTCCTGTG (8) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina ACAACAAAAT (2) 12.7 0.0127 E18.5 retina TCACAATGAG (2) 7.3 0.0073 E18.5 retina AGACAGAAAA 1.8 0.0018 E18.5 retina TTGTTGCTGG (5) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina TCACAATGAG (2) 19.6 0.0196 P0.5 retina TTGTTGCTGG (5) 9.8 0.0098 P0.5 retina CTGTACAGGG (3) 5.9 0.0059 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina TCACAATGAG (2) 65.1 0.0651 P2.5 retina CTGTACAGGG (3) 5.3 0.0053 P2.5 retina GCTTCCTGTG (8) 3.5 0.0035 P2.5 retina ACAACAAAAT (2) 1.8 0.0018 P2.5 retina TACTCTTTCT (2) 1.8 0.0018 P2.5 retina TTGTTGCTGG (5) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina TCACAATGAG (2) 35.7 0.0357 P4.5 retina ACAACAAAAT (2) 11.9 0.0119 P4.5 retina TTGTTGCTGG (5) 4 0.004 P4.5 retina TACTCTTTCT (2) 2 0.002 P4.5 retina TTACTGCAAT 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina TCACAATGAG (2) 56.7 0.0567 P6.5 retina ACAACAAAAT (2) 13.3 0.0133 P6.5 retina CTGTACAGGG (3) 6.7 0.0067 P6.5 retina TACTCTTTCT (2) 5 0.005 P6.5 retina TTGTTGCTGG (5) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina TCACAATGAG (2) 9.3 0.0093 P10.5 crx- retina TTGTTGCTGG (5) 9.3 0.0093 P10.5 crx- retina ACAACAAAAT (2) 7.4 0.0074 P10.5 crx- retina CTGTACAGGG (3) 1.9 0.0019 P10.5 crx- retina GCTCATAGTC (4) 1.9 0.0019 P10.5 crx- retina GCTTCCTGTG (8) 1.9 0.0019 P10.5 crx- retina TACTCTTTCT (2) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina TCACAATGAG (2) 9.6 0.0096 P10.5 crx+ retina TTGTTGCTGG (5) 9.6 0.0096 P10.5 crx+ retina ACAACAAAAT (2) 5.8 0.0058 P10.5 crx+ retina GCTTCCTGTG (8) 1.9 0.0019 P10.5 crx+ retina TACTCTTTCT (2) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal TTGTTGCTGG (5) 9.3 0.0093 Adult retinal ACAACAAAAT (2) 3.7 0.0037 Adult retinal GCTCATAGTC (4) 1.9 0.0019 Adult retinal GCTTCCTGTG (8) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL TTGTTGCTGG (5) 9.6 0.0096 ONL ACAACAAAAT (2) 1.9 0.0019 ONL TACTCTTTCT (2) 1.9 0.0019 ONL TTACTGCAAT 1.9 0.0019