Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.243797	3110098I04Rik	RIKEN cDNA 3110098I04 gene	11		78510
Mm.243797	4930579A11Rik	RIKEN cDNA 4930579A11 gene	11		75909
Human Homolog	VMP1[likely ortholog of rat vacuole membrane protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 28 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAACAATTTA (2) 1.6 0.0016 Cb medulloblastoma CAAGATTGCT (2) GAACAATTTA (2) GCTCTTGGCT (3) 20.8 0.0208 P8 GC+1d culture GTTTGCAGTC (2) 2.3 0.0023 P8 GC+SHH+1d culture GAACAATTTA (2) 3.5 0.0035 3T3 fibroblasts GTTTGCAGTC (2) 7 0.007 P1 cortex CAACATTGCT (2) GAACAATTTA (2) GCTCTTGGCT (3) 18.1 0.0181 Hypothalamus CAAGATTGCT (2) 3.6 0.0036 E12.5 retina CAAGATTGCT (2) GAACAATTTA (2) 3.8 0.0038 E14.5 retina CAACATTGCT (2) 1.8 0.0018 E16.5 retina GAACAATTTA (2) 3.6 0.0036 E18.5 retina CAAGATTGCT (2) 1.8 0.0018 P2.5 retina GAACAATTTA (2) GCTCTTGGCT (3) 3.6 0.0036 P6.5 retina GAACAATTTA (2) GCTCTTGGCT (3) 3.4 0.0034 P10.5 crx- retina GAACAATTTA (2) GCTCTTGGCT (3) 3.8 0.0038 P10.5 crx+ retina CAAGATTGCT (2) GAACAATTTA (2) GCTCTTGGCT (3) 7.6 0.0076 Adult retinal CAAGATTGCT (2) GCTCTTGGCT (3) GTTTGCAGTC (2) 7.5 0.0075