Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.243943	Sdccag1	serologically defined colon cancer antigen 1	12		66244
Mm.243943	9530029F08Rik	RIKEN cDNA 9530029F08 gene	17		78426
Mm.243943	Slc30a6	solute carrier family 30 (zinc transporter), member 6	17		210148
Gene Ontology	Golgi to endosome transport | zinc ion transport | zinc ion transporter activity
Human Homolog	SLC30A6[solute carrier family 30 (zinc transporter), member 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCAGTTTATT (6) 19.6 0.0196 Cb medulloblastoma TCAGTTTATT (6) 27.7 0.0277 P8 GC+1d culture TCAGTTTATT (6) 29.7 0.0297 P8 GC+1d culture CCTTTGGCCT (5) 1.1 0.0011 P8 GC+1d culture TATGGTGCCC (3) 1.1 0.0011 P8 GC+1d culture TCAGATTATT (3) 1.1 0.0011 P8 GC+SHH+1d culture TCAGTTTATT (6) 28.1 0.0281 P8 GC+SHH+1d culture TCAGATTATT (3) 1.2 0.0012 3T3 fibroblasts CCTTTGGCCT (5) 3.5 0.0035 P1 cortex TCAGTTTATT (6) 4.5 0.0045 Hypothalamus TCAGTTTATT (6) 19.9 0.0199 Hypothalamus TCAGATTATT (3) 1.8 0.0018 E12.5 retina TCAGTTTATT (6) 11.3 0.0113 E12.5 retina CCTTTGGCCT (5) 1.9 0.0019 E12.5 retina TATGGTGCCC (3) 1.9 0.0019 E12.5 retina TGGGAAAATG (6) 1.9 0.0019 E14.5 retina TCAGTTTATT (6) 25.5 0.0255 E14.5 retina TATGGTGCCC (3) 1.8 0.0018 E16.5 retina TCAGTTTATT (6) 14.5 0.0145 E16.5 retina AGTGTGTACA (7) 5.4 0.0054 E18.5 retina TCAGTTTATT (6) 10.9 0.0109 E18.5 retina AGTGTGTACA (7) 1.8 0.0018 E18.5 retina TCAGATTATT (3) 1.8 0.0018 P0.5 retina AGTGTGTACA (7) 3.9 0.0039 P0.5 retina TCAGTTTATT (6) 3.9 0.0039 P0.5 retina TGGGAAAATG (6) 2 0.002 P2.5 retina TCAGTTTATT (6) 21.1 0.0211 P2.5 retina TCAGATTATT (3) 5.3 0.0053 P2.5 retina CCTTTGGCCT (5) 3.5 0.0035 P4.5 retina TCAGTTTATT (6) 29.7 0.0297 P4.5 retina AGTGTGTACA (7) 2 0.002 P4.5 retina TCAGATTATT (3) 2 0.002 P6.5 retina TCAGTTTATT (6) 25 0.025 P6.5 retina AGTGTGTACA (7) 8.3 0.0083 P6.5 retina TCAGATTATT (3) 1.7 0.0017 P10.5 crx- retina TCAGTTTATT (6) 31.6 0.0316 P10.5 crx+ retina TCAGTTTATT (6) 7.7 0.0077 Adult retinal TCAGTTTATT (6) 5.6 0.0056 ONL TCAGTTTATT (6) 11.5 0.0115 ONL TGGGAAAATG (6) 1.9 0.0019