Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.243950	1700074G04Rik	RIKEN cDNA 1700074G04 gene	11		78628
Mm.243950	B230113M03Rik	RIKEN cDNA B230113M03 gene	11		217342
Gene Ontology	ligase activity | protein modification | ubiquitin conjugating enzyme activity | ubiquitin cycle
Human Homolog	E2-230K[likely ortholog of mouse ubiquitin-conjugating enzyme E2-230K]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 72 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTTCCCGGGC (5) 4.9 0.0049 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 Cb medulloblastoma CTTCCCGGGC (5) 2.3 0.0023 Cb medulloblastoma GAAGACCCAG (4) 2.3 0.0023 Cb medulloblastoma TGGCCATTGC (6) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture CTTCCCGGGC (5) 6.8 0.0068 P8 GC+1d culture AAGTGTGGCT (3) 1.1 0.0011 P8 GC+1d culture GCTACCGGTG (4) 1.1 0.0011 P8 GC+1d culture GCTGCAGCTG (8) 1.1 0.0011 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture CTTCCCGGGC (5) 4.7 0.0047 P8 GC+SHH+1d culture GAAGACCCAG (4) 2.3 0.0023 P8 GC+SHH+1d culture AAAGGGCTCT (5) 1.2 0.0012 P8 GC+SHH+1d culture CTTTGGCTTT (4) 1.2 0.0012 P8 GC+SHH+1d culture GTGGGAGAGG (4) 1.2 0.0012 3T3 fibroblasts AAAGGGCTCT (5) 3.5 0.0035 3T3 fibroblasts GTGGGAGAGG (4) 3.5 0.0035 E15 cortex CTTCCCGGGC (5) 4.9 0.0049 E15 cortex GTGGGAGAGG (4) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex AAGTGTGGCT (3) 4.5 0.0045 P1 cortex CTTTGGCTTT (4) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus CTTCCCGGGC (5) 5.4 0.0054 Hypothalamus GAAGACCCAG (4) 1.8 0.0018 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina AAAGGGCTCT (5) 1.9 0.0019 E12.5 retina CTTCCCGGGC (5) 1.9 0.0019 E12.5 retina GCTACCGGTG (4) 1.9 0.0019 E12.5 retina GGAAATGTGT (3) 1.9 0.0019 E12.5 retina TGGCCATTGC (6) 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina AAGTGTGGCT (3) 1.8 0.0018 E14.5 retina GAAGACCCAG (4) 1.8 0.0018 E16.5 retina CTTCCCGGGC (5) 7.2 0.0072 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina GCTGCAGCTG (8) 3.6 0.0036 E16.5 retina CTTTGGCTTT (4) 1.8 0.0018 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina AAGTGTGGCT (3) 1.8 0.0018 E18.5 retina CTTCCCGGGC (5) 1.8 0.0018 E18.5 retina GGAAATGTGT (3) 1.8 0.0018 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina GCTACCGGTG (4) 3.9 0.0039 P0.5 retina AAGTGTGGCT (3) 2 0.002 P0.5 retina GAAGACCCAG (4) 2 0.002 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina CTTCCCGGGC (5) 1.8 0.0018 P2.5 retina CTTTGGCTTT (4) 1.8 0.0018 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina CTTCCCGGGC (5) 4 0.004 P4.5 retina CTTTGGCTTT (4) 4 0.004 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina CTTCCCGGGC (5) 5 0.005 P6.5 retina CTTTGGCTTT (4) 1.7 0.0017 P6.5 retina GCTGCAGCTG (8) 1.7 0.0017 P10.5 crx- retina GGAAATGTGT (3) 3.7 0.0037 P10.5 crx- retina GAAGACCCAG (4) 1.9 0.0019 P10.5 crx+ retina CTTCCCGGGC (5) 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina GAAGACCCAG (4) 1.9 0.0019 P10.5 crx+ retina TGGCCATTGC (6) 1.9 0.0019 Adult retinal CTTCCCGGGC (5) 11.1 0.0111 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal GCTACCGGTG (4) 1.9 0.0019 Adult retinal GCTGCAGCTG (8) 1.9 0.0019 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL GAAGACCCAG (4) 1.9 0.0019 ONL GCTGCAGCTG (8) 1.9 0.0019