Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.244820	Tbp	TATA box binding protein	17	17 A2 (17 8.25 cM)	21374
Gene Ontology	DNA binding | nucleus | protein binding | regulation of transcription, DNA-dependent | RNA polymerase I transcription factor complex | RNA polymerase II transcription factor activity | transcription | transcription factor activity | transcription factor complex | transcription factor TFIID complex | transcription initiation from Pol II promoter
Human Homolog	TBP[TATA box binding protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 14 In Situ Hybridization Images

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SAGE Tags

Total 53 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGATCATACT (6) 6.5 0.0065 P8 Cb GC TGGTGCACAT 6.5 0.0065 P8 Cb GC GTTTTTAAAT (6) 1.6 0.0016 Cb medulloblastoma TGGTGCACAT 9.2 0.0092 Cb medulloblastoma GCAGACAACT (4) 4.6 0.0046 Cb medulloblastoma TGATCATACT (6) 2.3 0.0023 P8 GC+1d culture TGGTGCACAT 4.6 0.0046 P8 GC+1d culture GTTTTTAAAT (6) 2.3 0.0023 P8 GC+1d culture TGATCATACT (6) 2.3 0.0023 P8 GC+1d culture AAGTGACACT (2) 1.1 0.0011 P8 GC+SHH+1d culture AGAATAAGAG 46.8 0.0468 P8 GC+SHH+1d culture TGGTGCACAT 7 0.007 P8 GC+SHH+1d culture TGATCATACT (6) 4.7 0.0047 P8 GC+SHH+1d culture GTTTTTAAAT (6) 3.5 0.0035 E15 cortex TGGTGCACAT 4.9 0.0049 P1 cortex TGATCATACT (6) 4.5 0.0045 Hypothalamus GCAGACAACT (4) 3.6 0.0036 Hypothalamus TGATCATACT (6) 3.6 0.0036 Hypothalamus TGGTGCACAT 3.6 0.0036 Hypothalamus GTTTTTAAAT (6) 1.8 0.0018 E12.5 retina GTTTTTAAAT (6) 3.8 0.0038 E12.5 retina TGATCATACT (6) 3.8 0.0038 E12.5 retina TGGTGCACAT 3.8 0.0038 E14.5 retina TGGTGCACAT 7.3 0.0073 E14.5 retina TGATCATACT (6) 5.5 0.0055 E14.5 retina GCAGACAACT (4) 3.6 0.0036 E16.5 retina TGATCATACT (6) 14.5 0.0145 E16.5 retina GTTTTTAAAT (6) 7.2 0.0072 E18.5 retina TGGTGCACAT 7.3 0.0073 E18.5 retina TGATCATACT (6) 5.5 0.0055 P0.5 retina TGATCATACT (6) 3.9 0.0039 P0.5 retina GTTTTTAAAT (6) 2 0.002 P2.5 retina TGATCATACT (6) 12.3 0.0123 P2.5 retina TGGTGCACAT 7 0.007 P2.5 retina GTTTTTAAAT (6) 3.5 0.0035 P4.5 retina TGATCATACT (6) 19.8 0.0198 P4.5 retina TGGTGCACAT 5.9 0.0059 P6.5 retina TGATCATACT (6) 5 0.005 P6.5 retina GTTTTTAAAT (6) 3.3 0.0033 P6.5 retina TGGTGCACAT 3.3 0.0033 P10.5 crx- retina GTTTTTAAAT (6) 5.6 0.0056 P10.5 crx- retina TGGTGCACAT 3.7 0.0037 P10.5 crx- retina TGATCATACT (6) 1.9 0.0019 P10.5 crx+ retina TGGTGCACAT 7.7 0.0077 P10.5 crx+ retina GCAGACAACT (4) 1.9 0.0019 Adult retinal AAGTGACACT (2) 3.7 0.0037 Adult retinal GTTTTTAAAT (6) 3.7 0.0037 Adult retinal TGGTGCACAT 3.7 0.0037 Adult retinal TGATCATACT (6) 1.9 0.0019 ONL TGGTGCACAT 7.7 0.0077 ONL AAGTGACACT (2) 1.9 0.0019 ONL AGAATAAGAG 1.9 0.0019 ONL TGATCATACT (6) 1.9 0.0019