Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.24495	Ddx54	DEAD (Asp-Glu-Ala-Asp) box polypeptide 54	5		71990
Gene Ontology	ATP binding | ATP dependent helicase activity | helicase activity | hydrolase activity | nucleic acid binding | nucleus | regulation of transcription, DNA-dependent | RNA binding
Human Homolog	DDX54[DEAD (Asp-Glu-Ala-Asp) box polypeptide 54]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAGGGTT (5) 1.6 0.0016 P8 Cb GC CAAGTGTGGC (4) 1.6 0.0016 P8 Cb GC GGCCCTGAGT (12) 1.6 0.0016 P8 Cb GC TGCTGTTGGA 1.6 0.0016 P8 GC+1d culture AAAAAGGGTT (5) 1.1 0.0011 P8 GC+1d culture CAAGTGTGGC (4) 1.1 0.0011 P8 GC+1d culture TGCTGTTGGA 1.1 0.0011 P8 GC+SHH+1d culture AAAAAGGGTT (5) 2.3 0.0023 P8 GC+SHH+1d culture TGCTGTTGGA 2.3 0.0023 3T3 fibroblasts TGCTGTTGGA 3.5 0.0035 P1 cortex AAAAAGGGTT (5) 9.1 0.0091 Hypothalamus AAAAAGGGTT (5) 1.8 0.0018 E12.5 retina TGCTGTTGGA 5.6 0.0056 E12.5 retina AAAAAGGGTT (5) 3.8 0.0038 E12.5 retina CAAGTGTGGC (4) 3.8 0.0038 E14.5 retina TGCTGTTGGA 3.6 0.0036 E14.5 retina AAAAAGGGTT (5) 1.8 0.0018 E16.5 retina TGCTGTTGGA 5.4 0.0054 P0.5 retina CAAGTGTGGC (4) 5.9 0.0059 P0.5 retina TGCTGTTGGA 5.9 0.0059 P0.5 retina AAAAAGGGTT (5) 2 0.002 P2.5 retina AAAAAGGGTT (5) 3.5 0.0035 P2.5 retina CAAGTGTGGC (4) 3.5 0.0035 P2.5 retina TGCTGTTGGA 3.5 0.0035 P4.5 retina AAAAAGGGTT (5) 2 0.002 P4.5 retina TGCTGTTGGA 2 0.002 P6.5 retina TGCTGTTGGA 3.3 0.0033 P10.5 crx- retina TGCTGTTGGA 3.7 0.0037 P10.5 crx- retina AAAAAGGGTT (5) 1.9 0.0019 P10.5 crx- retina GGCCCTGAGT (12) 1.9 0.0019 P10.5 crx+ retina AAAAAGGGTT (5) 1.9 0.0019 Adult retinal TGCTGTTGGA 1.9 0.0019 ONL GGCCCTGAGT (12) 1.9 0.0019