Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.245084	Vdr	vitamin D receptor	15	5 56.0 cM	22337
Gene Ontology	calcium ion homeostasis | calcium ion transport | development | DNA binding | ligand-dependent nuclear receptor activity | nucleus | organogenesis | receptor activity | regulation of transcription, DNA-dependent | skeletal development | steroid hormone receptor activity | transcription factor activity
Human Homolog	VDR[vitamin D (1,25- dihydroxyvitamin D3) receptor]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 15 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAACCAAAA 1.6 0.0016 P8 Cb GC TCTGACTTCC (2) 1.6 0.0016 Cb medulloblastoma AAAACCAAAA 2.3 0.0023 P8 GC+1d culture TCTGACTTCC (2) 1.1 0.0011 3T3 fibroblasts TCTGACTTCC (2) 66.6 0.0666 Hypothalamus AAAACCAAAA 1.8 0.0018 Hypothalamus TCTGACTTCC (2) 1.8 0.0018 E12.5 retina AAAACCAAAA 3.8 0.0038 E14.5 retina AAAACCAAAA 3.6 0.0036 E16.5 retina AAAACCAAAA 3.6 0.0036 P0.5 retina AAAACCAAAA 2 0.002 P2.5 retina AAAACCAAAA 1.8 0.0018 P10.5 crx- retina TCTGACTTCC (2) 1.9 0.0019 Adult retinal AAAACCAAAA 1.9 0.0019 Adult retinal TCTGACTTCC (2) 1.9 0.0019