| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TATAAGAAGC TATGAGAAGC
| 8.1 | 0.0081 |
| Cb medulloblastoma | GCGTAAAAGA (3) GCTTTTGGTC TGCGCACACA
| 11.5 | 0.0115 |
| P8 GC+1d culture | GCGTAAAAGA (3) GCTTTTGGTC TATGAGAAGC TGCGCACACA TGCTCACCCT
| 9 | 0.009 |
| P8 GC+SHH+1d culture | GCGACGCCAA GCGTAAAAGA (3) GCTTTTGGTC TGCTCACCCT
| 9.4 | 0.0094 |
| 3T3 fibroblasts | GCGACGCCAA
| 3.5 | 0.0035 |
| Hypothalamus | GCGACGCCAA GCGTAAAAGA (3) TATAAGAAGC TATGAGAAGC
| 12.6 | 0.0126 |
| E12.5 retina | GCGTAAAAGA (3) TATGAGAAGC
| 5.7 | 0.0057 |
| E14.5 retina | GCGTAAAAGA (3) TATGAGAAGC TGCGCACACA
| 10.9 | 0.0109 |
| E16.5 retina | GCGTAAAAGA (3)
| 10.9 | 0.0109 |
| P0.5 retina | GCTTTTGGTC TGCGCACACA
| 5.9 | 0.0059 |
| P2.5 retina | GCGTAAAAGA (3) TATAAGAAGC TATGAGAAGC
| 8.8 | 0.0088 |
| P4.5 retina | GCGACGCCAA TATGAGAAGC
| 6 | 0.006 |
| P6.5 retina | GCGTAAAAGA (3) TATAAGAAGC TATGAGAAGC
| 8.3 | 0.0083 |
| P10.5 crx- retina | GCGTAAAAGA (3) TATGAGAAGC TGCTCACCCT
| 16.8 | 0.0168 |
| P10.5 crx+ retina | GCGTAAAAGA (3) GCTTTTGGTC TGCTCACCCT
| 17.3 | 0.0173 |
| Adult retinal | TATAAGAAGC TATGAGAAGC TGCTCACCCT
| 5.7 | 0.0057 |
| ONL | GCGTAAAAGA (3) TATAAGAAGC
| 9.6 | 0.0096 |