Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.24532
Nup160
nucleoporin 160
2
59015
Gene Ontology
acid phosphatase activity
|
nucleus
|
transport
Human Homolog
NUP160[nucleoporin 160kDa]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 57 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AATGTTTCTG (
4
)
24.5
0.0245
P8 Cb GC
GCAGTTTTGA
3.3
0.0033
P8 Cb GC
GCTATACAGA (
5
)
1.6
0.0016
Cb medulloblastoma
AATGTTTCTG (
4
)
6.9
0.0069
Cb medulloblastoma
CATTTTCAAA
(
6
)
2.3
0.0023
P8 GC+1d culture
AATGTTTCTG (
4
)
1.1
0.0011
P8 GC+1d culture
CATACAAACT
(
2
)
1.1
0.0011
P8 GC+1d culture
CATTTTCAAA
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
AATGTTTCTG (
4
)
16.4
0.0164
P8 GC+SHH+1d culture
CATACAAACT
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
GCTATACAGA (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTGTGTTGA (
5
)
1.2
0.0012
3T3 fibroblasts
AATGTTTCTG (
4
)
7
0.007
E15 cortex
AATGTTTCTG (
4
)
9.9
0.0099
E15 cortex
GCTATACAGA (
5
)
4.9
0.0049
P1 cortex
AATGTTTCTG (
4
)
4.5
0.0045
P1 cortex
GCAGTTTTGA
4.5
0.0045
P1 cortex
GCTATACAGA (
5
)
4.5
0.0045
Hypothalamus
AATGTTTCTG (
4
)
1.8
0.0018
Hypothalamus
CATACAAACT
(
2
)
1.8
0.0018
Hypothalamus
GCTATACAGA (
5
)
1.8
0.0018
E12.5 retina
AATGTTTCTG (
4
)
28.2
0.0282
E12.5 retina
GCTATACAGA (
5
)
1.9
0.0019
E12.5 retina
TTTGTGTTGA (
5
)
1.9
0.0019
E14.5 retina
AATGTTTCTG (
4
)
27.3
0.0273
E14.5 retina
CATACAAACT
(
2
)
5.5
0.0055
E14.5 retina
GCTATACAGA (
5
)
5.5
0.0055
E14.5 retina
TCTATATGCC
3.6
0.0036
E16.5 retina
AATGTTTCTG (
4
)
32.6
0.0326
E16.5 retina
GCTTGTTTTG (
5
)
3.6
0.0036
E18.5 retina
AATGTTTCTG (
4
)
25.5
0.0255
P0.5 retina
AATGTTTCTG (
4
)
23.6
0.0236
P0.5 retina
CATTTTCAAA
(
6
)
2
0.002
P0.5 retina
GCTATACAGA (
5
)
2
0.002
P2.5 retina
AATGTTTCTG (
4
)
19.4
0.0194
P2.5 retina
CATACAAACT
(
2
)
5.3
0.0053
P2.5 retina
GCTTGTTTTG (
5
)
1.8
0.0018
P4.5 retina
AATGTTTCTG (
4
)
9.9
0.0099
P4.5 retina
CATACAAACT
(
2
)
5.9
0.0059
P6.5 retina
AATGTTTCTG (
4
)
6.7
0.0067
P6.5 retina
GCTATACAGA (
5
)
5
0.005
P6.5 retina
CATACAAACT
(
2
)
3.3
0.0033
P6.5 retina
CATTTTCAAA
(
6
)
3.3
0.0033
P6.5 retina
GCTTGTTTTG (
5
)
1.7
0.0017
P10.5 crx- retina
AATGTTTCTG (
4
)
16.7
0.0167
P10.5 crx- retina
GCTATACAGA (
5
)
1.9
0.0019
P10.5 crx+ retina
AATGTTTCTG (
4
)
5.8
0.0058
P10.5 crx+ retina
GCTATACAGA (
5
)
3.8
0.0038
Adult retinal
AATGTTTCTG (
4
)
3.7
0.0037
Adult retinal
CATACAAACT
(
2
)
1.9
0.0019
Adult retinal
GCTATACAGA (
5
)
1.9
0.0019
Adult retinal
TCTATATGCC
1.9
0.0019
ONL
AATGTTTCTG (
4
)
7.7
0.0077
ONL
CATTTTCAAA
(
6
)
3.8
0.0038
ONL
GCTATACAGA (
5
)
3.8
0.0038
ONL
CATACAAACT
(
2
)
1.9
0.0019
ONL
TTTGTGTTGA (
5
)
1.9
0.0019
