Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.245355
3110023E09Rik
RIKEN cDNA 3110023E09 gene
7
68038
Gene Ontology
extracellular space
Human Homolog
MGC3234[hypothetical protein MGC3234]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 98 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
ACAGTGTCGT
(
4
)
8.2
0.0082
P8 Cb GC
TTGTTTTTTA (
2
)
3.3
0.0033
P8 Cb GC
AAGCTGAAGC (
9
)
1.6
0.0016
P8 Cb GC
CAAGGCTGGG
(
4
)
1.6
0.0016
P8 Cb GC
GCTACGATGT
(
2
)
1.6
0.0016
P8 Cb GC
TTGGAAACTG
(
2
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
ACAGTGTCGT
(
4
)
9.2
0.0092
Cb medulloblastoma
AGATCAGAAG
2.3
0.0023
Cb medulloblastoma
TTGTTTTTTA (
2
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
ACAGTGTCGT
(
4
)
28.5
0.0285
P8 GC+1d culture
GCTACGATGT
(
2
)
3.4
0.0034
P8 GC+1d culture
GGACCTGGCC (
7
)
3.4
0.0034
P8 GC+1d culture
TTGTTTTTTA (
2
)
3.4
0.0034
P8 GC+1d culture
AGATCAGAAG
1.1
0.0011
P8 GC+1d culture
CAAGGCTGGG
(
4
)
1.1
0.0011
P8 GC+1d culture
GAGTGACTGG
(
2
)
1.1
0.0011
P8 GC+1d culture
TTTCTGGCTC (
2
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
ACAGTGTCGT
(
4
)
19.9
0.0199
P8 GC+SHH+1d culture
GAGTGACTGG
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
GCTACGATGT
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
TTGTTTTTTA (
2
)
2.3
0.0023
P8 GC+SHH+1d culture
TTGGAAACTG
(
2
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
ACAGTGTCGT
(
4
)
17.5
0.0175
3T3 fibroblasts
GCTACGATGT
(
2
)
14
0.014
3T3 fibroblasts
AAGCTGAAGC (
9
)
3.5
0.0035
3T3 fibroblasts
GAGTGACTGG
(
2
)
3.5
0.0035
3T3 fibroblasts
TTGTTTTTTA (
2
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
GAGTGACTGG
(
2
)
4.9
0.0049
E15 cortex
TTGTTTTTTA (
2
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
GCTACGATGT
(
2
)
9.1
0.0091
P1 cortex
ACAGTGTCGT
(
4
)
4.5
0.0045
P1 cortex
GGACCTGGCC (
7
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
GAGTGACTGG
(
2
)
3.6
0.0036
Hypothalamus
AAGCTGAAGC (
9
)
1.8
0.0018
Hypothalamus
ACAGTGTCGT
(
4
)
1.8
0.0018
Hypothalamus
AGATCAGAAG
1.8
0.0018
Hypothalamus
GGACCTGGCC (
7
)
1.8
0.0018
Hypothalamus
TTGGAAACTG
(
2
)
1.8
0.0018
Hypothalamus
TTTCTGGCTC (
2
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
ACAGTGTCGT
(
4
)
3.8
0.0038
E12.5 retina
AAGCTGAAGC (
9
)
1.9
0.0019
E12.5 retina
GAGTGACTGG
(
2
)
1.9
0.0019
E12.5 retina
GCTACGATGT
(
2
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
GCTACGATGT
(
2
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
GCTACGATGT
(
2
)
1.8
0.0018
E16.5 retina
TTGTTTTTTA (
2
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
ACAGTGTCGT
(
4
)
1.8
0.0018
E18.5 retina
GAGTGACTGG
(
2
)
1.8
0.0018
E18.5 retina
TTGTTTTTTA (
2
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
ACAGTGTCGT
(
4
)
3.9
0.0039
P0.5 retina
GCTACGATGT
(
2
)
3.9
0.0039
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
ACAGTGTCGT
(
4
)
1.8
0.0018
P2.5 retina
CAAGGCTGGG
(
4
)
1.8
0.0018
P2.5 retina
TTGTTTTTTA (
2
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
TTGTTTTTTA (
2
)
4
0.004
P4.5 retina
AGATCAGAAG
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
ACAGTGTCGT
(
4
)
3.3
0.0033
P6.5 retina
CAAGGCTGGG
(
4
)
1.7
0.0017
P6.5 retina
GGACCTGGCC (
7
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
ACAGTGTCGT
(
4
)
5.6
0.0056
P10.5 crx- retina
GCTACGATGT
(
2
)
5.6
0.0056
P10.5 crx- retina
GGACCTGGCC (
7
)
1.9
0.0019
P10.5 crx- retina
TTGGAAACTG
(
2
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
ACAGTGTCGT
(
4
)
13.5
0.0135
P10.5 crx+ retina
AGATCAGAAG
1.9
0.0019
P10.5 crx+ retina
GGACCTGGCC (
7
)
1.9
0.0019
P10.5 crx+ retina
TTGTTTTTTA (
2
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
ACAGTGTCGT
(
4
)
7.4
0.0074
Adult retinal
TTGTTTTTTA (
2
)
3.7
0.0037
Adult retinal
AAGCTGAAGC (
9
)
1.9
0.0019
Adult retinal
AGATCAGAAG
1.9
0.0019
Adult retinal
CAAGGCTGGG
(
4
)
1.9
0.0019
Adult retinal
TTGGAAACTG
(
2
)
1.9
0.0019
Adult retinal
TTTCTGGCTC (
2
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
ACAGTGTCGT
(
4
)
3.8
0.0038
ONL
GAGTGACTGG
(
2
)
3.8
0.0038
ONL
GCTACGATGT
(
2
)
1.9
0.0019
ONL
TTTCTGGCTC (
2
)
1.9
0.0019
